RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	TMX3	Q96JJ7	454 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	COLEC11	Q9BWP8	271 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CLEC1B	Q9P126	229 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PARP2	Q9UGN5	583 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DNM3	Q9UQ16	869 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GIT1	Q9Y2X7	761 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	IPP	Q9Y573	584 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRUNE2	Q8WUY3	3088 aa		12.13	□□□□□ -0.47
NPIPB4-222	ENST00000614197	TCF20	Q9UGU0	1960 aa	Known RBP	12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	HIDE1	A8MVS5	230 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NPTXR	O95502	500 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GLP2R	O95838	553 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	UROD	P06132	367 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CTSA	P10619	480 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ARF4	P18085	180 aa	Predicted RBP	12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	OR1G1	P47890	313 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	SLC11A1	P49279	550 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	EFNA5	P52803	228 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PTGDR	Q13258	359 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRPF4B	Q13523	1007 aa	Known RBP	12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	UBXN11	Q5T124	520 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	KIAA1841	Q6NSI8	718 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	TMEM184A	Q6ZMB5	413 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CDK5RAP3	Q96JB5	506 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	RPGRIP1	Q96KN7	1286 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	RIPOR3	Q96MK2	946 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NECTIN4	Q96NY8	510 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GAD1	Q99259	594 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PHF7	Q9BWX1	381 aa	Predicted RBP	12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CD320	Q9NPF0	282 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GPRC5C	Q9NQ84	441 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	MRPL17	Q9NRX2	175 aa	Known RBP	12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DZANK1	Q9NVP4	752 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DPP7	Q9UHL4	492 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	KIAA1024	Q9UPX6	916 aa		12.12	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PHLPP2	Q6ZVD8	1323 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	LOXHD1	Q8IVV2	1947 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	TRANK1	O15050	2925 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	C2orf71	A6NGG8	1288 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ARL5C	A6NH57	179 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	C19orf67	A6NJJ6	358 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	MEIS3P2	A8K0S8	358 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GPR37L1	O60883	481 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	KLRC2	P26717	231 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GJB2	P29033	226 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	MLH1	P40692	756 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRPH	P41219	470 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NAMPT	P43490	491 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ITIH3	Q06033	890 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CBX2	Q14781	532 aa	Predicted RBP	12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ZRSR1	Q15695	479 aa	Known RBP	12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ZBTB33	Q86T24	672 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ZNF280B	Q86YH2	543 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	LRFN3	Q9BTN0	628 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	EIF2A	Q9BY44	585 aa	Known RBP	12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ZBP1	Q9H171	429 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	BHMT2	Q9H2M3	363 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DDX19A	Q9NUU7	478 aa	Known RBP	12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DNAJB4	Q9UDY4	337 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	KCNG1	Q9UIX4	513 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NR2E1	Q9Y466	385 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197	HCFC2	Q9Y5Z7	792 aa		12.11	□□□□□ -0.47
NPIPB4-222	ENST00000614197		A0A1B0GUA9	196 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CCDC169	A6NNP5	214 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NRP1	O14786	923 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	B4GALT5	O43286	388 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CLASP2	O75122	1294 aa	Known RBP	12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DDHD2	O94830	711 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	SSB	P05455	408 aa	Known RBP eCLIP	12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRKCB	P05771	671 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	MTHFR	P42898	656 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	SCNN1G	P51170	649 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NBR1	Q14596	966 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	LARP1B	Q659C4	914 aa	Known RBP	12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	CABP7	Q86V35	215 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	RNF135	Q8IUD6	432 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	SMG8	Q8ND04	991 aa	Known RBP	12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	RASSF8	Q8NHQ8	419 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DRC1	Q96MC2	740 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	APOL5	Q9BWW9	433 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NT5C3A	Q9H0P0	336 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	NXF3	Q9H4D5	531 aa	Known RBP	12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	TSHZ2	Q9NRE2	1034 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	HES2	Q9Y543	173 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PCDHB6	Q9Y5E3	794 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	IRAK3	Q9Y616	596 aa		12.1	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ZMYM2	Q9UBW7	1377 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	FAM86C2P	A6NEL3	165 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	PRR33	A8MZF0	331 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197		K7ERI5	159 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ACKR2	O00590	384 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	BMP15	O95972	392 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	ADH1A	P07327	375 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	AKAP5	P24588	427 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GLUD2	P49448	558 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	RBM10	P98175	930 aa	Known RBP	12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	GRIK3	Q13003	919 aa		12.09	□□□□□ -0.47
NPIPB4-222	ENST00000614197	DMP1	Q13316	513 aa	Predicted RBP	12.09	□□□□□ -0.47

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms