RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 ZNF233A6NK53 670 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 THAP12O43422 761 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 AOC2O75106 756 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 CAND2O75155 1236 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 CTNNA1P35221 906 aaKnown RBP11.63□□□□□ -0.55
FAM3A-221ENST00000612856 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 ERVK-24P63145 666 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 BFSP1Q12934 665 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 HASPINQ8TF76 798 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 NT5C1BQ96P26 610 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 NOX5Q96PH1 765 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 KIAA1683Q9H0B3 1180 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 PORCNQ9H237 461 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 DUSP10Q9Y6W6 482 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 SPTBN2O15020 2390 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 NWD2Q9ULI1 1742 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 FAM86B1E9PN63 330 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 HEXIM1O94992 359 aaKnown RBP11.63□□□□□ -0.55
FAM3A-221ENST00000612856 FAM86B2P0C5J1 330 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 ATF7P17544 494 aaPredicted RBP11.63□□□□□ -0.55
FAM3A-221ENST00000612856 CCNE1P24864 410 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 DSG3P32926 999 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 AMHR2Q16671 573 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 NSMCE1Q8WV22 266 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 KBTBD13C9JR72 458 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 NCK2O43639 380 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 PPP1R37O75864 691 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 CCNHP51946 323 aaPredicted RBP11.63□□□□□ -0.55
FAM3A-221ENST00000612856 MESDQ14696 234 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 SLC35G1Q2M3R5 365 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 CAPN12Q6ZSI9 719 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 MCPH1Q8NEM0 835 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 KRT12Q99456 494 aa11.63□□□□□ -0.55
FAM3A-221ENST00000612856 MED24O75448 989 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 MOCS3O95396 460 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 GH1P01241 217 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 EPHB4P54760 987 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 IRX1P78414 480 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 IL17AQ16552 155 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 TMEM139Q8IV31 216 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 OR2W6PQ8NHA6 318 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 MGARPQ8TDB4 240 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 HEXIM2Q96MH2 286 aaKnown RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 TRIM9Q9C026 710 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 UNC45AQ9H3U1 944 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 VIPAS39Q9H9C1 493 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 L3MBTL1Q9Y468 752 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 OPLAHO14841 1288 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 SLC25A27O95847 323 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 NR3C1P04150 777 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 HIRAP54198 1017 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 TMEM132BQ14DG7 1078 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 KRT31Q15323 416 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 EPHA7Q15375 998 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 ANKRD36BP1Q96IX9 119 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 FAM84AQ96KN4 292 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 PAPPAQ13219 1627 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 GYPCP04921 128 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 POLE2P56282 527 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 MXRA7P84157 204 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 PAK2Q13177 524 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 SNX1Q13596 522 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 KCNB1Q14721 858 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 RPGRIP1Q96KN7 1286 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 ZIM3Q96PE6 472 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 LBHD1Q9BQE6 289 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 MTA3Q9BTC8 594 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 MAK16Q9BXY0 300 aaKnown RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 DNAJC18Q9H819 358 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 SAMD15Q9P1V8 674 aa11.62□□□□□ -0.55
FAM3A-221ENST00000612856 CHORDC1Q9UHD1 332 aaPredicted RBP11.62□□□□□ -0.55
FAM3A-221ENST00000612856 DIAPH2O60879 1101 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 RANBP1P43487 201 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 ORC1Q13415 861 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 NR1I3Q14994 352 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 EPC2Q52LR7 807 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 SMC1BQ8NDV3 1235 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 SPDYE1Q8NFV5 336 aaPredicted RBP11.61□□□□□ -0.55
FAM3A-221ENST00000612856 OSMRQ99650 979 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 STIM2Q9P246 746 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 NOVA2Q9UNW9 492 aaKnown RBP11.61□□□□□ -0.55
FAM3A-221ENST00000612856 HYOU1Q9Y4L1 999 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 STK24Q9Y6E0 443 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 A6NNZ2 444 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PHF20L1A8MW92 1017 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 USP2O75604 605 aaPredicted RBP11.61□□□□□ -0.55
FAM3A-221ENST00000612856 CPP00450 1065 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 GJB1P08034 283 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PDHA1P08559 390 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 PDGFRBP09619 1106 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 CASP4P49662 377 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 FLT3LGP49771 235 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 TUBB8Q3ZCM7 444 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 ARMCX2Q7L311 632 aa11.61□□□□□ -0.55
FAM3A-221ENST00000612856 WNK4Q96J92 1243 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms