RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 ACKR2O00590 384 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 EOMESO95936 686 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 PRKCBP05771 671 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 LINC00271P0C7V0 271 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 LIG1P18858 919 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 RAB27AP51159 221 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 NCBP1Q09161 790 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 PRPF4BQ13523 1007 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 VARS2Q5ST30 1063 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 CDR2LQ86X02 465 aaPredicted RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 CMTR2Q8IYT2 770 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 IQUBQ8NA54 791 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 TMEM161BQ8NDZ6 487 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 STAMQ92783 540 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 DNAJC19Q96DA6 116 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 GUCD1Q96NT3 240 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 FIZ1Q96SL8 496 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 EIF2AQ9BY44 585 aaKnown RBP12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 TNMDQ9H2S6 317 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 CUEDC2Q9H467 287 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 TMEM134Q9H6X4 195 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 CERS4Q9HA82 394 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 PARVGQ9HBI0 331 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 KCNG1Q9UIX4 513 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 KCNH3Q9ULD8 1083 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 HPSEQ9Y251 543 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 PCDHB2Q9Y5E7 798 aa12.47□□□□□ -0.41
CCL3L3-201ENST00000612839 A0A1B0GVL5 298 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 TRAK2O60296 914 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 TBCAO75347 108 aaKnown RBP12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM13AO94988 1023 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 SKIP12755 728 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 PFKFB1P16118 471 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 SMTNP53814 917 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 NCKAP1LP55160 1127 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 BTG3Q14201 252 aaPredicted RBP12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 LONRF3Q496Y0 759 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 PAN2Q504Q3 1202 aaKnown RBP12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 CLLU1OSQ5K130 101 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 SLC27A1Q6PCB7 646 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 MRPL10Q7Z7H8 261 aaKnown RBP12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 FIBCD1Q8N539 461 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 MYCT1Q8N699 235 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 RNF169Q8NCN4 708 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 SMG8Q8ND04 991 aaKnown RBP12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 KCNN1Q92952 543 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 LPPQ93052 612 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 CCDC51Q96ER9 411 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 CASD1Q96PB1 797 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 C17orf80Q9BSJ5 609 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 ZHX3Q9H4I2 956 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 CHMP5Q9NZZ3 219 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 MYO9BQ13459 2157 aa12.46□□□□□ -0.41
CCL3L3-201ENST00000612839 FAM237AA0A1B0GTK4 181 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 A0A1W2PQ27 194 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 A0A1W2PQ64 194 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 A0A1W2PQD8 194 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 EPOPA6NHQ4 379 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 MAPTP10636 758 aaKnown RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 ERVK-21P61565 698 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 NT5DC1Q5TFE4 455 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 HAUS6Q7Z4H7 955 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 ARNTL2Q8WYA1 636 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 CLP1Q92989 425 aaKnown RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 IPO9Q96P70 1041 aaKnown RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 TGS1Q96RS0 853 aaKnown RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 CDX2Q99626 313 aaPredicted RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 PDZD7Q9H5P4 517 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 MTUS1Q9ULD2 1270 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 HES2Q9Y543 173 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 IPPQ9Y573 584 aa12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 MRPL42Q9Y6G3 142 aaKnown RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 COL4A4P53420 1690 aaPredicted RBP12.46□□□□□ -0.42
CCL3L3-201ENST00000612839 FRMD3A2A2Y4 597 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 TBKBP1A7MCY6 615 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 HOXA2O43364 376 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 ACTN4O43707 911 aaKnown RBP12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 NDUFA8P51970 172 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 TPRNQ4KMQ1 711 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 ATF7IP2Q5U623 682 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 EEF1DP3Q658K8 133 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 AGMOQ6ZNB7 445 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 LRRC55Q6ZSA7 311 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 SFR1Q86XK3 245 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 FAM178BQ8IXR5 827 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 CNNM3Q8NE01 707 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 HELQQ8TDG4 1101 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 PGBD4Q96DM1 585 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 ACO2Q99798 780 aaKnown RBP12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 PYM1Q9BRP8 204 aaKnown RBP12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 TRIM9Q9C026 710 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 TRIM6Q9C030 488 aaPredicted RBP12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 TMEM117Q9H0C3 514 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 GOLPH3LQ9H4A5 285 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 NXF3Q9H4D5 531 aaKnown RBP12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 PRDM12Q9H4Q4 367 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 HCSTQ9UBK5 93 aa12.45□□□□□ -0.42
CCL3L3-201ENST00000612839 SERTAD1Q9UHV2 236 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms