RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 TICRRQ7Z2Z1 1910 aa8.18□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NOTCH4Q99466 2003 aa8.18□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PCNX2A6NKB5 2137 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 IGKV6D-21A0A0A0MT36 114 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 KLRF2D3W0D1 207 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HIP1O00291 1037 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 C2CD2LO14523 706 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 GAS2O43903 313 aaKnown RBP8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HBP1O60381 514 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 OFD1O75665 1012 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 EPN2O95208 641 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ATG7O95352 703 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 EFEMP2O95967 443 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 VTNP04004 478 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SOD2P04179 222 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 EIF4BP23588 611 aaKnown RBP8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RAP1GAPP47736 663 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 AK2P54819 239 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HAND2P61296 217 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NTHL1P78549 312 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 COL28A1Q2UY09 1125 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SH3PXD2AQ5TCZ1 1133 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RNF43Q68DV7 783 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 LILRA6Q6PI73 481 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ELMSAN1Q6PJG2 1045 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 TAS1R1Q7RTX1 841 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RNF168Q8IYW5 571 aaPredicted RBP8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ENAHQ8N8S7 591 aaPredicted RBP8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 GLIS3Q8NEA6 775 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RSPH1Q8WYR4 309 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PIGSQ96S52 555 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 KXD1Q9BQD3 176 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PHF20Q9BVI0 1012 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PLA2G2FQ9BZM2 168 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ADAMTS10Q9H324 1103 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SMOC1Q9H4F8 434 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RIOX1Q9H6W3 641 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 LMAN1LQ9HAT1 526 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 JPH1Q9HDC5 661 aaPredicted RBP8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PKD2L1Q9P0L9 805 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MSRB2Q9Y3D2 182 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 UBIAD1Q9Y5Z9 338 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 IGSF10Q6WRI0 2623 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NEDD4P46934 1319 aa8.17□□□□□ -1.1
PTCHD3P1-201ENST00000612350 DSPP15924 2871 aaKnown RBP8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PALM3A6NDB9 673 aaPredicted RBP8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MEIS3P2A8K0S8 358 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MEIS2O14770 477 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 TGM5O43548 720 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ZMYND10O75800 440 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 DDHD2O94830 711 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PAPSS2O95340 614 aaPredicted RBP8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 C22orf31O95567 290 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 COL1A2P08123 1366 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CHRNB1P11230 501 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CEACAM1P13688 526 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HOXC13P31276 330 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SLC26A2P50443 739 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ACTR2P61160 394 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 AKAP13Q12802 2813 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 TROAPQ12815 778 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 TRAF1Q13077 416 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CCDC178Q5BJE1 867 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NOMO2Q5JPE7 1267 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ZNF484Q5JVG2 852 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 TTC22Q5TAA0 569 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 USP17L6PQ6QN14 398 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CEP68Q76N32 757 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 GRASPQ7Z6J2 395 aaPredicted RBP8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HOMER1Q86YM7 354 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ESR2Q92731 530 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 LPPQ93052 612 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HERC2P3Q9BVR0 1158 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SLC9A2Q9UBY0 812 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MAD2L2Q9UI95 211 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NDRG2Q9UN36 371 aaKnown RBP8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SSX2IPQ9Y2D8 614 aa8.16□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ZMYM6O95789 1325 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 FAM221BA6H8Z2 402 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 C4orf47A7E2U8 309 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PIK3CDO00329 1044 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MAN2B1O00754 1011 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MAFGO15525 162 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CYTH3O43739 400 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HYAL3O43820 417 aaPredicted RBP8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ECI2O75521 394 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ALDH2P05091 517 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 URODP06132 367 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ATP4AP20648 1035 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 CSRP1P21291 193 aaKnown RBP8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 HOXA6P31267 233 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PHKA2P46019 1235 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MFAP1P55081 439 aaKnown RBP8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 NLRP11P59045 1033 aaKnown RBP8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 MTMR1Q13613 665 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 IQCA1Q86XH1 822 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 PALB2Q86YC2 1186 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 SPEM1Q8N4L4 309 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 ITFG1Q8TB96 612 aa8.15□□□□□ -1.1
PTCHD3P1-201ENST00000612350 RILPL2Q969X0 211 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms