RNA–Protein interactions for RNA: ENST00000612045.4

CBWD1-220, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-220ENST00000612045 BAP1Q92560 729 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 ZNF668Q96K58 619 aaPredicted RBP13.4□□□□□ -0.26
CBWD1-220ENST00000612045 ZBTB45Q96K62 511 aaPredicted RBP13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MFSD14AQ96MC6 490 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
CBWD1-220ENST00000612045 NFKBIZQ9BYH8 718 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 SETD4Q9NVD3 440 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 GCNT4Q9P109 453 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 AKT3Q9Y243 479 aa13.4□□□□□ -0.26
CBWD1-220ENST00000612045 HAS3O00219 553 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 KIAA0391O15091 583 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 EXTL3O43909 919 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 PRKCBP05771 671 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 ACTN1P12814 892 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 PSEN2P49810 448 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 POLR2FP61218 127 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 HTRA3P83110 453 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 MTF1Q14872 753 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 KLHDC7AQ5VTJ3 777 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 RAD9BQ6WBX8 426 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 TOGARAM2Q6ZUX3 1019 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 RRAGAQ7L523 313 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 CD99L2Q8TCZ2 262 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 LMBR1Q8WVP7 490 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 FAM213AQ9BRX8 229 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 GANQ9H2C0 597 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 FZD8Q9H461 694 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 TRMT1Q9NXH9 659 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 ANKFY1Q9P2R3 1169 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 SRRDQ9UH36 339 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 AGO2Q9UKV8 859 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 PLAGL2Q9UPG8 496 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 A0A0B4J269 797 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 ZNF233A6NK53 670 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 TTLL13PA6NNM8 815 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 INO80B-WBP1J3KQ70 363 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 SEPT4O43236 478 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 VTNP04004 478 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 C6orf222P0C671 652 aaPredicted RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 HNRNPH3P31942 346 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 GJA9P57773 515 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 MYL7Q01449 175 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 MBTD1Q05BQ5 628 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 PPP3CAQ08209 521 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 CACNB2Q08289 660 aaPredicted RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 NFRKBQ6P4R8 1299 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 KIAA0319LQ8IZA0 1049 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 PARD3BQ8TEW8 1205 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 CCDC127Q96BQ5 260 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 CHP1Q99653 195 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 MSTO1Q9BUK6 570 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 INO80BQ9C086 356 aaPredicted RBP13.39□□□□□ -0.27
CBWD1-220ENST00000612045 IFT122Q9HBG6 1241 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 NLRC4Q9NPP4 1024 aa13.39□□□□□ -0.27
CBWD1-220ENST00000612045 BRCA2P51587 3418 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 MYADML2A6NDP7 307 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 LRRC53A6NM62 1247 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 ACKR2O00590 384 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 P4HA2O15460 535 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 CLDN3O15551 220 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 TOM1L1O75674 476 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 ELNP15502 786 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 HOXD10P28358 340 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 PHKA2P46019 1235 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 GCLMP48507 274 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 NLRP11P59045 1033 aaKnown RBP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 PURAQ00577 322 aaKnown RBP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 ENPEPQ07075 957 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 PDXDC1Q6P996 788 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 USP37Q86T82 979 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 SP7Q8TDD2 431 aaPredicted RBP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 PPP1R13BQ96KQ4 1090 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 MAP7D2Q96T17 732 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 KATNAL1Q9BW62 490 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 NUCKS1Q9H1E3 243 aaKnown RBP13.38□□□□□ -0.27
CBWD1-220ENST00000612045 MINDY3Q9H8M7 445 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 SIX2Q9NPC8 291 aa13.38□□□□□ -0.27
CBWD1-220ENST00000612045 A0A087WZ62 844 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 MBLAC1A4D2B0 266 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 LRRIQ3A6PVS8 624 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 GPR25O00155 361 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 PMM2O15305 246 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 CCP110O43303 1012 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 KPNA6O60684 536 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 LDHAP00338 332 aaKnown RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 RARBP10826 455 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 PRKAR2AP13861 404 aaKnown RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 UCHL3P15374 230 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 CDK17Q00537 523 aa13.37□□□□□ -0.27
CBWD1-220ENST00000612045 HSP90AA2PQ14568 343 aaPredicted RBP13.37□□□□□ -0.27
CBWD1-220ENST00000612045 TRIM65Q6PJ69 517 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms