RNA–Protein interactions for RNA: ENST00000611278.4

ZNF248-208, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best) BASIC

Gene ZNF248, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-208ENST00000611278 EPHB3P54753 998 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 NRLP54845 237 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 PPP2R3AQ06190 1150 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 GOLGA8FQ08AF8 430 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 GOLGA8DPQ0D2H9 430 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 LRRC32Q14392 662 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 ZNF568Q3ZCX4 644 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 TEX35Q5T0J7 233 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 ECHDC2Q86YB7 292 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 IL31RAQ8NI17 732 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 KAT2BQ92831 832 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 NKD2Q969F2 451 aaPredicted RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 MTMR8Q96EF0 704 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 RPF1Q9H9Y2 349 aaKnown RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 FAM105AQ9NUU6 356 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 TYW1Q9NV66 732 aaKnown RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 RAPGEFL1Q9UHV5 662 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 PLAGL2Q9UPG8 496 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 CNTNAP5Q8WYK1 1306 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 LRRC37A2A6NM11 1700 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 A0A087WZ62 844 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 NBNO60934 754 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 MYOGP15173 224 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 KPNA1P52294 538 aaPredicted RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 LMBRD2Q68DH5 695 aaPredicted RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 ANKS3Q6ZW76 656 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 DCP1BQ8IZD4 617 aaKnown RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 C17orf53Q8N3J3 647 aaPredicted RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 CCDC112Q8NEF3 446 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 PPP1R13LQ8WUF5 828 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 FDXACB1Q9BRP7 624 aaPredicted RBP9.33□□□□□ -0.92
ZNF248-208ENST00000611278 RGS18Q9NS28 235 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 MYH4Q9Y623 1939 aa9.33□□□□□ -0.92
ZNF248-208ENST00000611278 PI4K2BG5E9Z4 385 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 MAN2B1O00754 1011 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 NOVP48745 357 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 GHRHRQ02643 423 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 SLC27A1Q6PCB7 646 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 C4orf19Q8IY42 314 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 ENGASEQ8NFI3 743 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 ZNF560Q96MR9 790 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 ACAP3Q96P50 834 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 FNBP1Q96RU3 617 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 COL20A1Q9P218 1284 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 NOC2LQ9Y3T9 749 aaKnown RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 GSTTP1A0A1W2PQM5 241 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 TNNC2P02585 160 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 IDEP14735 1019 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 DMWDQ09019 674 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 DHX8Q14562 1220 aaKnown RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 NECTIN1Q15223 517 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 LARP1BQ659C4 914 aaKnown RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 FBXL18Q96ME1 805 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 SNX14Q9Y5W7 946 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 MCM3APO60318 1980 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 KINO60870 393 aaKnown RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 TPM3P06753 285 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 PDZD4Q76G19 769 aaPredicted RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.32□□□□□ -0.927e-6■■■■□ 20.5
ZNF248-208ENST00000611278 PCDHB2Q9Y5E7 798 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 GRXCR2A6NFK2 248 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 DESP17661 470 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 PDIA3P30101 505 aaKnown RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 CIITAP33076 1130 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 ATXN3P54252 364 aaPredicted RBP9.32□□□□□ -0.92
ZNF248-208ENST00000611278 Q4G0T1 1027 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 CCDC65Q8IXS2 484 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 TRAPPC12Q8WVT3 735 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 CHAMP1Q96JM3 812 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 CSRNP2Q9H175 543 aa9.32□□□□□ -0.92
ZNF248-208ENST00000611278 TMEM221A6NGB7 291 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 M0R296 226 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 FOXK2Q01167 660 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 MYL7Q01449 175 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 GABPB1Q06547 395 aaPredicted RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 SIGLEC14Q08ET2 396 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 BFSP1Q12934 665 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 TRPC3Q13507 836 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 ALCAMQ13740 583 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 CCDC73Q6ZRK6 1079 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 CD302Q8IX05 232 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 GOLGA6L1Q8N7Z2 621 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 RASGRP4Q8TDF6 673 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 EPHX3Q9H6B9 360 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 TCF20Q9UGU0 1960 aaKnown RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 A0A0U1RQF3 1178 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 MEIS2O14770 477 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 SLC26A4O43511 780 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 GSPT1P15170 499 aaKnown RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 SP100P23497 879 aaPredicted RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 KCNQ1P51787 676 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 MRPS9P82933 396 aaKnown RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 ARID5AQ03989 594 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 HDAC7Q8WUI4 952 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
ZNF248-208ENST00000611278 BRD9Q9H8M2 597 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 DSEQ9UL01 958 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 PCDHB13Q9Y5F0 798 aa9.31□□□□□ -0.92
ZNF248-208ENST00000611278 GRIN2DO15399 1336 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms