RNA–Protein interactions for RNA: ENST00000611016.2

TNXB-208, Transcript of tenascin XB, humanhuman

TSL 5 BASIC

Gene TNXB, Length 6,083 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-208ENST00000611016 NFU1Q9UMS0 254 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 KPNA7A9QM74 516 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 KIAA0391O15091 583 aaKnown RBP16.62■□□□□ 0.25
TNXB-208ENST00000611016 FOXP2O15409 715 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 LCP1P13796 627 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 DRP2Q13474 957 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 HP1BP3Q5SSJ5 553 aaPredicted RBP16.62■□□□□ 0.25
TNXB-208ENST00000611016 BTBD8Q5XKL5 378 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 TMEM143Q96AN5 459 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 SPON2Q9BUD6 331 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 PARD6BQ9BYG5 372 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 TRIM4Q9C037 500 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 FTLP02792 175 aaPredicted RBP16.62■□□□□ 0.25
TNXB-208ENST00000611016 FSCBQ5H9T9 825 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 EFHC2Q5JST6 749 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 FAM102AQ5T9C2 384 aaPredicted RBP16.62■□□□□ 0.25
TNXB-208ENST00000611016 TIPINQ9BVW5 301 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 SP110Q9HB58 689 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 SNX24Q9Y343 169 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 CA4P22748 312 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 CACNB2Q08289 660 aaPredicted RBP16.62■□□□□ 0.25
TNXB-208ENST00000611016 TKFCQ3LXA3 575 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 KIFC3Q9BVG8 833 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 IP6K2Q9UHH9 426 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 SPECC1L-ADORA2AF8WAN1 911 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 SPARCL1Q14515 664 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 BARGINQ6ZT62 677 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 CRLF3Q8IUI8 442 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 EDEM3Q9BZQ6 932 aa16.62■□□□□ 0.25
TNXB-208ENST00000611016 CEP152O94986 1710 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 TAP1Q03518 808 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 AP1B1Q10567 949 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 ARID5BQ14865 1188 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 TEDDM1Q5T9Z0 273 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 STOX1Q6ZVD7 989 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 GUF1Q8N442 669 aaKnown RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 FAM151AQ8WW52 585 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 PFASO15067 1338 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 NTSR2O95665 410 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 APOEP02649 317 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 STYK1Q6J9G0 422 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 DDX56Q9NY93 547 aaKnown RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 NYAP2Q9P242 653 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 RRP15Q9Y3B9 282 aaKnown RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 KDM6AO15550 1401 aaPredicted RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 IFNA8P32881 189 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 SBK1Q52WX2 424 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 GRIK1P39086 918 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 CDR2Q01850 454 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 TMEM39BQ9GZU3 492 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 SMARCAD1Q9H4L7 1026 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 FARP1Q9Y4F1 1045 aaPredicted RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 SRGAP2O75044 1071 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 GH1P01241 217 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 KCNJ6P48051 423 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 FBXL13Q8NEE6 735 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 DHX35Q9H5Z1 703 aaKnown RBP16.61■□□□□ 0.25
TNXB-208ENST00000611016 ZNF212Q9UDV6 495 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
TNXB-208ENST00000611016 ARHGEF40Q8TER5 1519 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 RALAP11233 206 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 XKR3Q5GH77 459 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SAMD7Q7Z3H4 446 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 KATNAL1Q9BW62 490 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SCOCQ9UIL1 159 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SPATA31A5Q5VU36 1347 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SPATA31A7Q8IWB4 1347 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 PI4K2BG5E9Z4 385 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 OCRLQ01968 901 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 CASP8Q14790 479 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 LRRC43Q8N309 656 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 MAML1Q92585 1016 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 TMEM60Q9H2L4 133 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 TTC7AQ9ULT0 858 aaPredicted RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 CLTCQ00610 1675 aaKnown RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 TMEM247A6NEH6 219 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SNX2O60749 519 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 CSF1RP07333 972 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 MX2P20592 715 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 ZNF211Q13398 564 aaPredicted RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 HABP4Q5JVS0 413 aaKnown RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 WDR75Q8IWA0 830 aaKnown RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 CCL15-CCL14A0A0B4J2E2 113 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 CCL15Q16663 113 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 DCAF4L1Q3SXM0 396 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 HEATR6Q6AI08 1181 aaKnown RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 SHC4Q6S5L8 630 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 ANGPTL8Q6UXH0 198 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 ASIC4Q96FT7 647 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 VCPKMTQ9H867 229 aa16.6■□□□□ 0.25
TNXB-208ENST00000611016 SARS2Q9NP81 518 aaKnown RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.6■□□□□ 0.25
TNXB-208ENST00000611016 FOXN1O15353 648 aa16.59■□□□□ 0.25
TNXB-208ENST00000611016 HSPA4LO95757 839 aa16.59■□□□□ 0.25
TNXB-208ENST00000611016 ZBTB17Q13105 803 aa16.59■□□□□ 0.25
TNXB-208ENST00000611016 PDE1CQ14123 709 aaPredicted RBP16.59■□□□□ 0.25
TNXB-208ENST00000611016 SPATA2LQ8IUW3 424 aaPredicted RBP16.59■□□□□ 0.25
TNXB-208ENST00000611016 SEPT1Q8WYJ6 367 aa16.59■□□□□ 0.25
TNXB-208ENST00000611016 UPP2O95045 317 aa16.59■□□□□ 0.25
TNXB-208ENST00000611016 ESRRAP11474 423 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms