RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SHC3Q92529 594 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 HINFPQ9BQA5 517 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 KIAA1586Q9HCI6 787 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 OSGEPQ9NPF4 335 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PDLIM7Q9NR12 457 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 FAM114A2Q9NRY5 505 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 HOXC10Q9NYD6 342 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PPP2R3BQ9Y5P8 575 aa11.28□□□□□ -0.6
PABPC1-224ENST00000610907 PARP14Q460N5 1801 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 DENND3A2RUS2 1198 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 STBD1O95210 358 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 EGFRP00533 1210 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 FTLP02792 175 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 KCNA2P16389 499 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 ABCB4P21439 1286 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 ADSSP30520 456 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 RNASE9P60153 205 aaKnown RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 MRPS25P82663 173 aaKnown RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 SKOR1P84550 965 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 SPDYCQ5MJ68 293 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 SNRNP48Q6IEG0 339 aaKnown RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 UBL4BQ8N7F7 174 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 PLEKHO2Q8TD55 490 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 CEP170P1Q96L14 293 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 ZIM3Q96PE6 472 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 TEX13BQ9BXU2 312 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 GPRC5CQ9NQ84 441 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 SEPT11Q9NVA2 429 aaKnown RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 GABBR1Q9UBS5 961 aa11.27□□□□□ -0.61
PABPC1-224ENST00000610907 ZNF214Q9UL59 606 aaPredicted RBP11.27□□□□□ -0.61
PABPC1-224ENST00000610907 IGSF9BQ9UPX0 1349 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 FAM187AA6NFU0 413 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 SPATA31C2B4DYI2 1134 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 TISP43B9A030 160 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ANKRD63C9JTQ0 380 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 LRRN2O75325 713 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 GGPS1O95749 300 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 PTENP60484 403 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ERVK-9P63128 1117 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 MTMR3Q13615 1198 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 FAM153CQ494X1 144 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 XKR3Q5GH77 459 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 PLA2G4FQ68DD2 849 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 MIS18BP1Q6P0N0 1132 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 SAMD7Q7Z3H4 446 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 RPUSD2Q8IZ73 545 aaKnown RBP11.26□□□□□ -0.61
PABPC1-224ENST00000610907 FBXL13Q8NEE6 735 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ARHGEF26Q96DR7 871 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 IFT74Q96LB3 600 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 NT5C1BQ96P26 610 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 AP1M1Q9BXS5 423 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 RAB17Q9H0T7 212 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 GOLPH3Q9H4A6 298 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 JPH1Q9HDC5 661 aaPredicted RBP11.26□□□□□ -0.61
PABPC1-224ENST00000610907 SLC9A2Q9UBY0 812 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 FAM153AQ9UHL3 310 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 NOCTQ9UK39 431 aaKnown RBP11.26□□□□□ -0.61
PABPC1-224ENST00000610907 UTP11Q9Y3A2 253 aaKnown RBP11.26□□□□□ -0.61
PABPC1-224ENST00000610907 RIPK3Q9Y572 518 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ALG6Q9Y672 507 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 SYNGAP1Q96PV0 1343 aa11.26□□□□□ -0.61
PABPC1-224ENST00000610907 ESYT3A0FGR9 886 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 PPFIA4O75335 1185 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 FGGP02679 453 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 ADRB2P07550 413 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 ICAM3P32942 547 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 DRG2P55039 364 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 POU5F1Q01860 360 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 GCNT1Q02742 428 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 CYP24A1Q07973 514 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 DGKZQ13574 1117 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 DHX34Q14147 1143 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 HLTFQ14527 1009 aaKnown RBP eCLIP11.25□□□□□ -0.612e-6■■■□□ 16.6
PABPC1-224ENST00000610907 TBC1D10BQ4KMP7 808 aaPredicted RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 NOL9Q5SY16 702 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 ABHD15Q6UXT9 468 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 CBWD2Q8IUF1 395 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 GPD1LQ8N335 351 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 DNERQ8NFT8 737 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 EPS8L1Q8TE68 723 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 SLC20A1Q8WUM9 679 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 DHX38Q92620 1227 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
PABPC1-224ENST00000610907 RUNDC3BQ96NL0 473 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 WRNIP1Q96S55 665 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 CAPS2Q9BXY5 557 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 WNT8AQ9H1J5 351 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 RAB20Q9NX57 234 aa11.25□□□□□ -0.61
PABPC1-224ENST00000610907 CYP39A1Q9NYL5 469 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms