RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, human

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM2-208	ENST00000607559	FZD8	Q9H461	694 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	TLE6	Q9H808	572 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	TBC1D13	Q9NVG8	400 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	ZMYM2	Q9UBW7	1377 aa		11.91	□□□□□ -0.5
TPM2-208	ENST00000607559	MEIS3P2	A8K0S8	358 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	LINC01565	O15544	149 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	TSPAN1	O60635	241 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	CD2BP2	O95400	341 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	GALT	P07902	379 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	CYP11B2	P19099	503 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	ZP2	Q05996	745 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	MBTD1	Q05BQ5	628 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	NCBP1	Q09161	790 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	PTGDR	Q13258	359 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	VARS2	Q5ST30	1063 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	SPOUT1	Q5T280	376 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	CDCA2	Q69YH5	1023 aa	Predicted RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	NOTUM	Q6P988	496 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	DDX53	Q86TM3	631 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	SMG8	Q8ND04	991 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	ASAP3	Q8TDY4	903 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	SUSD6	Q92537	303 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	PRIMPOL	Q96LW4	560 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	CSRNP2	Q9H175	543 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	NRDE2	Q9H7Z3	1164 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	UPF2	Q9HAU5	1272 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	RAPGEFL1	Q9UHV5	662 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	CD207	Q9UJ71	328 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	NOL7	Q9UMY1	257 aa	Known RBP	11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	C5orf42	Q9H799	3197 aa		11.9	□□□□□ -0.5
TPM2-208	ENST00000607559	PRR33	A8MZF0	331 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	C1R	P00736	705 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	HOXB8	P17481	243 aa	Predicted RBP	11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	ATP2B1	P20020	1258 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	NRIP1	P48552	1158 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	RILPL1	Q5EBL4	403 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	HAUS3	Q68CZ6	603 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	GPR65	Q8IYL9	337 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	VN1R2	Q8NFZ6	395 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	MICAL1	Q8TDZ2	1067 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	LPP	Q93052	612 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	IGSF21	Q96ID5	467 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	POP1	Q99575	1024 aa	Known RBP	11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	TMEM175	Q9BSA9	504 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	S1PR5	Q9H228	398 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	RSAD1	Q9HA92	442 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	PCDHB6	Q9Y5E3	794 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	ZDBF2	Q9HCK1	2354 aa		11.89	□□□□□ -0.51
TPM2-208	ENST00000607559	C2orf71	A6NGG8	1288 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	HIDE1	A8MVS5	230 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	DCX	O43602	365 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	LILRB3	O75022	631 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ERLIN2	O94905	339 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ALDH2	P05091	517 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ARF4	P18085	180 aa	Predicted RBP	11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	FOSB	P53539	338 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	DSC1	Q08554	894 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	CUL4A	Q13619	759 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	GIT2	Q14161	759 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	CBX2	Q14781	532 aa	Predicted RBP	11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	IL17A	Q16552	155 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ECM1	Q16610	540 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	HYI	Q5T013	277 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ARL6IP4	Q66PJ3	421 aa	Known RBP	11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	PADI6	Q6TGC4	694 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	RNF169	Q8NCN4	708 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	GSTCD	Q8NEC7	633 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	TCF25	Q9BQ70	676 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	NTPCR	Q9BSD7	190 aa	Known RBP	11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	RAB34	Q9BZG1	259 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	ZBP1	Q9H171	429 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	IGFLR1	Q9H665	355 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	C11orf16	Q9NQ32	467 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	LRWD1	Q9UFC0	647 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	LHX6	Q9UPM6	363 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	GIT1	Q9Y2X7	761 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	IPP	Q9Y573	584 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	PCDHGC5	Q9Y5F6	944 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559	KIAA1671	Q9BY89	1806 aa		11.88	□□□□□ -0.51
TPM2-208	ENST00000607559		A0A087WWV3	80 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	INO80B-WBP1	J3KQ70	363 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	SLC26A4	O43511	780 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	B4GALT3	O60512	393 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	DDHD2	O94830	711 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	PAPLN	O95428	1278 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	CTSA	P10619	480 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	PBX3	P40426	434 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	NAMPT	P43490	491 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	AFF1	P51825	1210 aa	Known RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	ATP2C1	P98194	919 aa	Predicted RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	GNL2	Q13823	731 aa	Known RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	SMC1A	Q14683	1233 aa	Known RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	SLC27A1	Q6PCB7	646 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	TMC7	Q7Z402	723 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	TMEM173	Q86WV6	379 aa	Predicted RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	ZNF280B	Q86YH2	543 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	RNF168	Q8IYW5	571 aa	Predicted RBP	11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	KIFAP3	Q92845	792 aa		11.87	□□□□□ -0.51
TPM2-208	ENST00000607559	KCNN1	Q92952	543 aa		11.87	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms