RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 ALDH7A1P49419 539 aaKnown RBP13.59□□□□□ -0.23
CTSA-210ENST00000606000 SCNN1GP51170 649 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 RAD51AP2Q09MP3 1159 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 RESTQ13127 1097 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 MAPK7Q13164 816 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 SF3A1Q15459 793 aaKnown RBP13.59□□□□□ -0.23
CTSA-210ENST00000606000 DUSP6Q16828 381 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 SLC27A1Q6PCB7 646 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 EFHBQ8N7U6 833 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 URGCPQ8TCY9 931 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.23
CTSA-210ENST00000606000 CCDC51Q96ER9 411 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 TRIM6Q9C030 488 aaPredicted RBP13.59□□□□□ -0.23
CTSA-210ENST00000606000 CXCL16Q9H2A7 254 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 FZD8Q9H461 694 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 PDZD7Q9H5P4 517 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 TLE6Q9H808 572 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 PRMT7Q9NVM4 692 aaPredicted RBP13.59□□□□□ -0.23
CTSA-210ENST00000606000 KLK14Q9P0G3 267 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 LZTS1Q9Y250 596 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 CLIC4Q9Y696 253 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 MYO7AQ13402 2215 aa13.59□□□□□ -0.23
CTSA-210ENST00000606000 A0A1B0GUA9 196 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 ARL5CA6NH57 179 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 SFI1A8K8P3 1242 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 MBTPS2O43462 519 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 SSBP05455 408 aaKnown RBP eCLIP13.58□□□□□ -0.24
CTSA-210ENST00000606000 CA8P35219 290 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 PEX3P56589 373 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 KRT17Q04695 432 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 PCBP1Q15365 356 aaKnown RBP eCLIP13.58□□□□□ -0.241e-6■■□□□ 13.4
CTSA-210ENST00000606000 TMEM119Q4V9L6 283 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 HYIQ5T013 277 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 ARL6IP4Q66PJ3 421 aaKnown RBP13.58□□□□□ -0.24
CTSA-210ENST00000606000 RINT1Q6NUQ1 792 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 LLGL2Q6P1M3 1020 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 C1orf186Q6ZWK4 172 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 TMC7Q7Z402 723 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 BRAPQ7Z569 592 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 CABP7Q86V35 215 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 TMEM169Q96HH4 297 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 IGSF21Q96ID5 467 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 MSLNLQ96KJ4 702 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 CACNG4Q9UBN1 327 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 DNM3Q9UQ16 869 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 STK24Q9Y6E0 443 aa13.58□□□□□ -0.24
CTSA-210ENST00000606000 NPHP3-ACAD11A0A0J9YXS1 232 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 C2orf71A6NGG8 1288 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 NCBP1Q09161 790 aaKnown RBP13.57□□□□□ -0.24
CTSA-210ENST00000606000 PRPF4BQ13523 1007 aaKnown RBP13.57□□□□□ -0.24
CTSA-210ENST00000606000 MAPK6Q16659 721 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 FAM187BQ17R55 369 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 TMEM132AQ24JP5 1023 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 NT5DC1Q5TFE4 455 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 FAM178BQ8IXR5 827 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 CNNM3Q8NE01 707 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 GSTCDQ8NEC7 633 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 RABGGTAQ92696 567 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 KIFAP3Q92845 792 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 PPP2R3CQ969Q6 453 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 PRIMPOLQ96LW4 560 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 APOL5Q9BWW9 433 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 ZBP1Q9H171 429 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 C2orf40Q9H1Z8 148 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 MARCH5Q9NX47 278 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 PARP2Q9UGN5 583 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 PUF60Q9UHX1 559 aaKnown RBP13.57□□□□□ -0.24
CTSA-210ENST00000606000 CD207Q9UJ71 328 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 MTMR6Q9Y217 621 aa13.57□□□□□ -0.24
CTSA-210ENST00000606000 PRG3Q9Y2Y8 225 aaPredicted RBP13.57□□□□□ -0.24
CTSA-210ENST00000606000 MYH11P35749 1972 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 CCDC169A6NNP5 214 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 NRP1O14786 923 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 INPPL1O15357 1258 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 NCK2O43639 380 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 NPTX2P47972 431 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 SLC12A3P55017 1021 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 CEBPZQ03701 1054 aaKnown RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 KCNC3Q14003 757 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 SMC1AQ14683 1233 aaKnown RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 PPP2R5AQ15172 486 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 PTPAQ15257 358 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 SPECC1Q5M775 1068 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 USP49Q70CQ1 688 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 TAS1R3Q7RTX0 852 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 DDX53Q86TM3 631 aaKnown RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 COLGALT2Q8IYK4 626 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 INTS4Q96HW7 963 aaKnown RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 CDK5RAP3Q96JB5 506 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 FAM193BQ96PV7 902 aaPredicted RBP13.56□□□□□ -0.24
CTSA-210ENST00000606000 SNTG2Q9NY99 539 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 A0A0C4DFX4 3053 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 PHLPP2Q6ZVD8 1323 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 BRWD1Q9NSI6 2320 aa13.56□□□□□ -0.24
CTSA-210ENST00000606000 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms