RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 TCTN1Q2MV58 587 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 L1TD1Q5T7N2 865 aaKnown RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ATF7IP2Q5U623 682 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MRPL10Q7Z7H8 261 aaKnown RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MYOCDQ8IZQ8 938 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SPATA20Q8TB22 786 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SP7Q8TDD2 431 aaPredicted RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ZNF668Q96K58 619 aaPredicted RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RAD9AQ99638 391 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MRPL9Q9BYD2 267 aaKnown RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 OSBPL7Q9BZF2 842 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TRIM6Q9C030 488 aaPredicted RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ZHX3Q9H4I2 956 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RC3H2Q9HBD1 1191 aaKnown RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 FAM105AQ9NUU6 356 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 EXOC1Q9NV70 894 aa10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CXXC1Q9P0U4 656 aaPredicted RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CGNQ9P2M7 1197 aaKnown RBP10.41□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SFI1A8K8P3 1242 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 HNRNPDLO14979 420 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 NR1I2O75469 434 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RPN1P04843 607 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MCF2P10911 925 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PPP1R2P41236 205 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 AFMP43652 599 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 DEFB103AP81534 67 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CUL4BQ13620 913 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 BMT2Q1RMZ1 405 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 COBLL1Q53SF7 1204 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 NT5DC1Q5TFE4 455 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SLFN12LQ6IEE8 588 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MPZL3Q6UWV2 235 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TAS1R3Q7RTX0 852 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ZNF598Q86UK7 904 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RTN4RL1Q86UN2 441 aaPredicted RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ECHDC2Q86YB7 292 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 CMTR2Q8IYT2 770 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 TMEM174Q8WUU8 243 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 SAMD11Q96NU1 681 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ACCSQ96QU6 501 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 ACO2Q99798 780 aaKnown RBP10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 KIFC3Q9BVG8 833 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PDZD7Q9H5P4 517 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PTPRHQ9HD43 1115 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 MSRAQ9UJ68 235 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 LRFN2Q9ULH4 789 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 RWDD3Q9Y3V2 267 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 PCDHB7Q9Y5E2 793 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 STYXL1Q9Y6J8 313 aa10.4□□□□□ -0.74
SQSTM1P1-201ENST00000603451 NLRC5Q86WI3 1866 aa10.4□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CITO14578 2027 aa10.4□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PDCD11Q14690 1871 aaKnown RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 B4GALT5O43286 388 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TLL1O43897 1013 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KLRC4O43908 158 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GADD45BO75293 160 aaPredicted RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CSDE1O75534 798 aaKnown RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 DGKIO75912 1065 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GCNT3O95395 438 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LIG1P18858 919 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FGFR4P22455 802 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LIG4P49917 911 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 MCL1Q07820 350 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NOLC1Q14978 699 aaKnown RBP eCLIP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TMEM132AQ24JP5 1023 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZNF568Q3ZCX4 644 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 UBXN11Q5T124 520 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 EPM2AIP1Q7L775 607 aaPredicted RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TRIML1Q8N9V2 468 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GOLGA5Q8TBA6 731 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 STAMQ92783 540 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZNF689Q96CS4 500 aaPredicted RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TSPAN18Q96SJ8 248 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZBED2Q9BTP6 218 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TMEM117Q9H0C3 514 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TOPORSQ9NS56 1045 aaPredicted RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LMBRD1Q9NUN5 540 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GIT1Q9Y2X7 761 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 PCDHB2Q9Y5E7 798 aa10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 TDRD15B5MCY1 1934 aaKnown RBP10.39□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KIAA1671Q9BY89 1806 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ABLIM1O14639 778 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CLDN3O15551 220 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ATF7P17544 494 aaPredicted RBP10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GARTP22102 1010 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 NMT1P30419 496 aaKnown RBP10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GRM5P41594 1212 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 FAM109BQ6ICB4 259 aaPredicted RBP10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GLB1LQ6UWU2 654 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ABI1Q8IZP0 508 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 LRRC43Q8N309 656 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 ZNF507Q8TCN5 953 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 SMARCE1Q969G3 411 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 BICD1Q96G01 975 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 YME1L1Q96TA2 773 aa10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 CCDC94Q9BW85 323 aaPredicted RBP10.38□□□□□ -0.75
SQSTM1P1-201ENST00000603451 GBP3Q9H0R5 595 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms