RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 TMEM175Q9BSA9 504 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 EIF2AQ9BY44 585 aaKnown RBP23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 UBN1Q9NPG3 1134 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 DZANK1Q9NVP4 752 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 IPPQ9Y573 584 aa23.57■■□□□ 1.36
PPFIA3-209ENST00000602783 NRP1O14786 923 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 MCM7P33993 719 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 POU5F1BQ06416 359 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 PTPN14Q15678 1187 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 ATAT1Q5SQI0 421 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 NOTUMQ6P988 496 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 SUGP1Q8IWZ8 645 aaKnown RBP23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 PIGOQ8TEQ8 1089 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 TMEM60Q9H2L4 133 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 RNF39Q9H2S5 420 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 STK39Q9UEW8 545 aa23.56■■□□□ 1.36
PPFIA3-209ENST00000602783 MYO10Q9HD67 2058 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 ZDBF2Q9HCK1 2354 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 POTEMA6NI47 508 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 C2CD4DB7Z1M9 353 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 ARL2P36404 184 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 RARRES1P49788 294 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 CAPSQ13938 189 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 CABP7Q86V35 215 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 PPFIBP1Q86W92 1011 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 IFNLR1Q8IU57 520 aaPredicted RBP23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 FBXL6Q8N531 539 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 FAM184AQ8NB25 1140 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 ASIC4Q96FT7 647 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 KLHL5Q96PQ7 755 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 EMILIN2Q9BXX0 1053 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 CSRNP2Q9H175 543 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 HES2Q9Y543 173 aa23.55■■□□□ 1.36
PPFIA3-209ENST00000602783 ARL5CA6NH57 179 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 GLRA2P23416 452 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 KLRC2P26717 231 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 MBTD1Q05BQ5 628 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 IER5LQ5T953 404 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 FBXO18Q8NFZ0 1043 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 CCDC51Q96ER9 411 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 GAD1Q99259 594 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 APOL6Q9BWW8 343 aa23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 FOXP1Q9H334 677 aaPredicted RBP23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 PRG3Q9Y2Y8 225 aaPredicted RBP23.54■■□□□ 1.36
PPFIA3-209ENST00000602783 CNPP09543 421 aaKnown RBP23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 ARF4P18085 180 aaPredicted RBP23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 MLH1P40692 756 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 OR1G1P47890 313 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 RABEP1Q15276 862 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 AMHR2Q16671 573 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 KIAA1841Q6NSI8 718 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 TMC5Q6UXY8 1006 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 COLGALT2Q8IYK4 626 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 KREMEN2Q8NCW0 462 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 TRIM6Q9C030 488 aaPredicted RBP23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 MRPL17Q9NRX2 175 aaKnown RBP23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 MIOSQ9NXC5 875 aa23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 DBR1Q9UK59 544 aaKnown RBP23.53■■□□□ 1.36
PPFIA3-209ENST00000602783 SPDYE4A6NLX3 237 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 C2CD2LO14523 706 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 USO1O60763 962 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 LILRB3O75022 631 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 XRCC6P12956 609 aaKnown RBP eCLIP23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 GNL2Q13823 731 aaKnown RBP23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 MAEAQ7L5Y9 396 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 FEZF2Q8TBJ5 459 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 ZFP42Q96MM3 310 aa23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 POLR3FQ9H1D9 316 aaPredicted RBP23.52■■□□□ 1.36
PPFIA3-209ENST00000602783 INPPL1O15357 1258 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 B4GALT5O43286 388 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 SOD2P04179 222 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 SPATA31C1P0DKV0 1188 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 MRE11P49959 708 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 SCNN1GP51170 649 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 CLCN4P51793 760 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 TAS1R1Q7RTX1 841 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 CDR2LQ86X02 465 aaPredicted RBP23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 NOSTRINQ8IVI9 506 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 PRSS33Q8NF86 280 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 NFKBIZQ9BYH8 718 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 GPRC5CQ9NQ84 441 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 MARCH5Q9NX47 278 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 SORCS3Q9UPU3 1222 aa23.51■■□□□ 1.35
PPFIA3-209ENST00000602783 URODP06132 367 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 OR52Z1P0C646 297 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 DSC1Q08554 894 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 ORC2Q13416 577 aaPredicted RBP23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 ZNF174Q15697 407 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 TTC38Q5R3I4 469 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 CATSPER3Q86XQ3 398 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 HACE1Q8IYU2 909 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 TDRD5Q8NAT2 981 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 HERC2P3Q9BVR0 1158 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 NXF3Q9H4D5 531 aaKnown RBP23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 SFXN1Q9H9B4 322 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 TUFT1Q9NNX1 390 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 LIMD1Q9UGP4 676 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 GIT1Q9Y2X7 761 aa23.5■■□□□ 1.35
PPFIA3-209ENST00000602783 LRRIQ4A6NIV6 560 aa23.49■■□□□ 1.35
PPFIA3-209ENST00000602783 MED24O75448 989 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms