RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 ARMCX6Q7L4S7 300 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 NCAPG2Q86XI2 1143 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 VSIG1Q86XK7 387 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 ABTB1Q969K4 478 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 DDX47Q9H0S4 455 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 DNAAF2Q9NVR5 837 aaKnown RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 LIN7AO14910 233 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 PALMO75781 387 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 NCALDP61601 193 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 GFPT1Q06210 699 aaPredicted RBP16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 CCDC155Q8N6L0 562 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 MKL1Q969V6 931 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 TEPSINQ96N21 525 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 MRIQ9BWK5 157 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 FGFBP2Q9BYJ0 223 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 PCMTD2Q9NV79 361 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
PPFIA3-206ENST00000602655 EML1O00423 815 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 PSMA7O14818 248 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 RGS16O15492 202 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 MYL1P05976 194 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 BAATQ14032 418 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 CCDC125Q86Z20 511 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 BICD1Q96G01 975 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF668Q96K58 619 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 NUDCD1Q96RS6 583 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 TRIM9Q9C026 710 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 LRRC10BA6NIK2 292 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 SRRM3A6NNA2 597 aaPredicted RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 TRAF5O00463 557 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 HSPA9P38646 679 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 ANKRD42Q8N9B4 389 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 PNMA5Q96PV4 448 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 PLEKHG4BQ96PX9 1271 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF577Q9BSK1 485 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 TRIM7Q9C029 511 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 CNOT10Q9H9A5 744 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 KCNK9Q9NPC2 374 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 WDR35Q9P2L0 1181 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 NID2Q14112 1375 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 MSH4O15457 936 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 FLT3P36888 993 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 RPS6P62753 249 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 PRPF4BQ13523 1007 aaKnown RBP16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 MTMR8Q96EF0 704 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 FAM129AQ9BZQ8 928 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 NLRC4Q9NPP4 1024 aa16.49■□□□□ 0.23
PPFIA3-206ENST00000602655 C5orf60A6NFR6 353 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 CLIC2O15247 247 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 SUN1O94901 812 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 COPS2P61201 443 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 ITIH3Q06033 890 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 MTMR3Q13615 1198 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 ZC3H18Q86VM9 953 aaKnown RBP16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 PHACTR1Q9C0D0 580 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 COL20A1Q9P218 1284 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 RCN2Q14257 317 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 LRIG3Q6UXM1 1119 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 MIPOL1Q8TD10 442 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 DYDC2Q96IM9 177 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 PREBQ9HCU5 417 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 SLC12A4Q9UP95 1085 aa16.48■□□□□ 0.23
PPFIA3-206ENST00000602655 DDX60LQ5H9U9 1706 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 OATP04181 439 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 IMPDH2P12268 514 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 MAGEA8P43361 318 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 FKBP1AP62942 108 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 DPY19L2Q6NUT2 758 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 ADAT2Q7Z6V5 191 aaKnown RBP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 FAM114A1Q8IWE2 563 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 DNAJC9Q8WXX5 260 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 RMDN3Q96TC7 470 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 FGFR1OP2Q9NVK5 253 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 PLA2G4BP0C869 781 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 MAGEA10P43363 369 aaPredicted RBP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 ERMARDQ5T6L9 678 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 ARHGEF16Q5VV41 709 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 CATSPER3Q86XQ3 398 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 PPP1R13LQ8WUF5 828 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 KIFAP3Q92845 792 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 RAB17Q9H0T7 212 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 GOLPH3Q9H4A6 298 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 SALL4Q9UJQ4 1053 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 BLOC1S6Q9UL45 172 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 UAP1Q16222 522 aaPredicted RBP16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 DCAF15Q66K64 600 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 FAM83AQ86UY5 434 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 MREGQ8N565 214 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 ZNF280CQ8ND82 737 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 OPTNQ96CV9 577 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 GMCL1Q96IK5 515 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 NDNQ99608 321 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 RNF146Q9NTX7 359 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 RMND1Q9NWS8 449 aa16.47■□□□□ 0.23
PPFIA3-206ENST00000602655 NKX1-2Q9UD57 310 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms