RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 RANBP2P49792 3224 aaKnown RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 LCHNA4D1U4 455 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 LINC01553A4QN01 128 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 HNRNPDLO14979 420 aaKnown RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 NPTXRO95502 500 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 FGFR1P11362 822 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 AFMP43652 599 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 LIG4P49917 911 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 TTC3P53804 2025 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 NCKAP1LP55160 1127 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 RNASELQ05823 741 aaKnown RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 ZNF568Q3ZCX4 644 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 ZPBP2Q6X784 338 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 MRPL10Q7Z7H8 261 aaKnown RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 SFR1Q86XK3 245 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 ARNTL2Q8WYA1 636 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 ZNF689Q96CS4 500 aaPredicted RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 FAM193BQ96PV7 902 aaPredicted RBP14.28□□□□□ -0.12
SRRM1-223ENST00000600523 TRIM9Q9C026 710 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 RSAD1Q9HA92 442 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 TNFSF13BQ9Y275 285 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 IPPQ9Y573 584 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 PCDHB12Q9Y5F1 795 aa14.28□□□□□ -0.12
SRRM1-223ENST00000600523 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 CLDN3O15551 220 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 GTPBP6O43824 516 aaPredicted RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 NR1I2O75469 434 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 TOM1L1O75674 476 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 GCNT3O95395 438 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 RB1P06400 928 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 CTNNB1P35222 781 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 NDUFA8P51970 172 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 YARSP54577 528 aaKnown RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 ERVK-21P61565 698 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 KYAT1Q16773 422 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 ZNF598Q86UK7 904 aaKnown RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 TMEM192Q8IY95 271 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 CRIPAKQ8N1N5 446 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 FBXO22Q8NEZ5 403 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 HELQQ8TDG4 1101 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 STAMQ92783 540 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 RPS6KC1Q96S38 1066 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 ACO2Q99798 780 aaKnown RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 C7orf25Q9BPX7 421 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 C11orf84Q9BUA3 381 aaPredicted RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 APOL6Q9BWW8 343 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 PLVAPQ9BX97 442 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 ST6GALNAC4Q9H4F1 302 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 PDZD7Q9H5P4 517 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 TSHZ2Q9NRE2 1034 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 OLFML3Q9NRN5 406 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 TOPORSQ9NS56 1045 aaPredicted RBP14.27□□□□□ -0.13
SRRM1-223ENST00000600523 PARP2Q9UGN5 583 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 SERTAD1Q9UHV2 236 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 MTUS1Q9ULD2 1270 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 TBX20Q9UMR3 447 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 HPSEQ9Y251 543 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 INPP5FQ9Y2H2 1132 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 GIT1Q9Y2X7 761 aa14.27□□□□□ -0.13
SRRM1-223ENST00000600523 FAM237AA0A1B0GTK4 181 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 PVALEFA0A1B0GWK0 134 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 LAG3P18627 525 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 ALDH7A1P49419 539 aaKnown RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 GTF2BQ00403 316 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 PTPROQ16827 1216 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 LONRF3Q496Y0 759 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 NOMO2Q5JPE7 1267 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 UBXN11Q5T124 520 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 NT5DC1Q5TFE4 455 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 CNNM4Q6P4Q7 775 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 MPZL3Q6UWV2 235 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 Q7L0L9 218 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 SYCP3Q8IZU3 236 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 KCNN1Q92952 543 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 LPPQ93052 612 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 DNAJC19Q96DA6 116 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 PAGE5Q96GU1 130 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 GBP4Q96PP9 640 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 CCDC94Q9BW85 323 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 TARS2Q9BW92 718 aaKnown RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 EIF2AQ9BY44 585 aaKnown RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 TTYH1Q9H313 450 aaPredicted RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 CERS4Q9HA82 394 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 RC3H2Q9HBD1 1191 aaKnown RBP14.26□□□□□ -0.13
SRRM1-223ENST00000600523 ANKFY1Q9P2R3 1169 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 COL4A6Q14031 1691 aa14.26□□□□□ -0.13
SRRM1-223ENST00000600523 ZMYM2Q9UBW7 1377 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 ZNF202O95125 648 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 MCF2P10911 925 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 ATF7P17544 494 aaPredicted RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 NMT1P30419 496 aaKnown RBP14.25□□□□□ -0.13
SRRM1-223ENST00000600523 PPM1AP35813 382 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 BMPR1AP36894 532 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 FAM160A1Q05DH4 1040 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 EPC2Q52LR7 807 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 CLLU1OSQ5K130 101 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 SLFN12LQ6IEE8 588 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 UNC13DQ70J99 1090 aa14.25□□□□□ -0.13
SRRM1-223ENST00000600523 ZNF720Q7Z2F6 126 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms