RNA–Protein interactions for RNA: ENST00000600440.5

SYDE1-204, Transcript of synapse defective Rho GTPase homolog 1, humanhuman

TSL 1 (best) BASIC

Gene SYDE1, Length 3,058 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE1-204ENST00000600440 OVGP1Q12889 678 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 DRAP1Q14919 205 aaPredicted RBP17.24■□□□□ 0.35
SYDE1-204ENST00000600440 CCDC152Q4G0S7 254 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 CAVIN4Q5BKX8 364 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 GALNT17Q6IS24 598 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 ARHGAP27Q6ZUM4 889 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 UBL4BQ8N7F7 174 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 STMN2Q93045 179 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 SLC7A6OSQ96CW6 309 aaPredicted RBP17.24■□□□□ 0.35
SYDE1-204ENST00000600440 NPHS2Q9NP85 383 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 LRCH1Q9Y2L9 728 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 CFAP69A5D8W1 941 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 PYGMP11217 842 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 PPP2R5EQ16537 467 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 SGSM1Q2NKQ1 1148 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 DAGLBQ8NCG7 672 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 PPFIBP2Q8ND30 876 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 MCUR1Q96AQ8 359 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 DCLRE1BQ9H816 532 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 ZFP69BQ9UJL9 534 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 NAALADL1Q9UQQ1 740 aa17.24■□□□□ 0.35
SYDE1-204ENST00000600440 CASZ1Q86V15 1759 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 SFI1A8K8P3 1242 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 MARK3P27448 753 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 MCL1Q07820 350 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 KCNA1Q09470 495 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 PARP6Q2NL67 630 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 HS2ST1Q7LGA3 356 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 MTDHQ86UE4 582 aaKnown RBP17.23■□□□□ 0.35
SYDE1-204ENST00000600440 RDH13Q8NBN7 331 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 ZFAND2BQ8WV99 257 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 NRG4Q8WWG1 115 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 ANKRD27Q96NW4 1050 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 CYTH2Q99418 400 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 LRRC27Q9C0I9 530 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 KCTD10Q9H3F6 313 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 SLAIN2Q9P270 581 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 RAD21O60216 631 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 ECEL1O95672 775 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 KLRK1P26718 216 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 EIF6P56537 245 aaKnown RBP17.23■□□□□ 0.35
SYDE1-204ENST00000600440 KRT17Q04695 432 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 PABPC4Q13310 644 aaKnown RBP eCLIP17.23■□□□□ 0.35
SYDE1-204ENST00000600440 NSMFQ6X4W1 530 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 BCORQ6W2J9 1755 aa17.23■□□□□ 0.35
SYDE1-204ENST00000600440 POTEFA5A3E0 1075 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 POTEIP0CG38 1075 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 T-ENOLP0DO92 83 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 COMTP21964 271 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 COILP38432 576 aaPredicted RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 DEUP1Q05D60 604 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 MFSD5Q6N075 450 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 POTEGQ6S5H5 508 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 POTEEQ6S8J3 1075 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 VPS52Q8N1B4 723 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 SERPINB12Q96P63 405 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 MTMR9Q96QG7 549 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 PREBQ9HCU5 417 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 ALG13Q9NP73 1137 aaKnown RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 DNAJC12Q9UKB3 198 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 PCDHA12Q9UN75 941 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 ADAMTS7Q9UKP4 1686 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 KRT15P19012 456 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 SKIV2L2P42285 1042 aaKnown RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 ISLR2Q6UXK2 745 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 MTUS1Q9ULD2 1270 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 SYNGAP1Q96PV0 1343 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 CLDN3O15551 220 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 CCNFP41002 786 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 CPA2P48052 419 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 NEK3P51956 506 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 SLC20A1Q8WUM9 679 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 MXD3Q9BW11 206 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 ROPN1BQ9BZX4 212 aaPredicted RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 ROPN1Q9HAT0 212 aaPredicted RBP17.22■□□□□ 0.35
SYDE1-204ENST00000600440 WASF2Q9Y6W5 498 aa17.22■□□□□ 0.35
SYDE1-204ENST00000600440 CAMTA1Q9Y6Y1 1673 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 A0A0A6YYK5 440 aaPredicted RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 A0A0G2JND7 137 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TJP3O95049 919 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 BAG2O95816 211 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TTLL1O95922 423 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TRIM49P0CI25 452 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TRIM49CP0CI26 452 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 PCP11498 1178 aaKnown RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 DYNC1I2Q13409 638 aaKnown RBP17.21■□□□□ 0.35
SYDE1-204ENST00000600440 EPHA7Q15375 998 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 CFAP157Q5JU67 520 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 LRRC74BQ6ZQY2 392 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 DGKHQ86XP1 1220 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 USP54Q70EL1 1684 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 GCNT3O95395 438 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 FGRP09769 529 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 TMEM253P0C7T8 217 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 CHRNB2P17787 502 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 LMNB1P20700 586 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 ADCY8P40145 1251 aa17.21■□□□□ 0.35
SYDE1-204ENST00000600440 PRKCIP41743 596 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms