RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 GDF15Q99988 308 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 EIF2AQ9BY44 585 aaKnown RBP21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 PTPRHQ9HD43 1115 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 CHST12Q9NRB3 414 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 TNFSF13BQ9Y275 285 aa21.95■■□□□ 1.1
SHKBP1-222ENST00000600320 MICAL3Q7RTP6 2002 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 ENPP3O14638 875 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 FGBP02675 491 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 CD44P16070 742 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 ZSCAN20P17040 1043 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 PROZP22891 400 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 PRCPP42785 496 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 LIG4P49917 911 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 IKBKEQ14164 716 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 TWF2Q6IBS0 349 aaKnown RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 NOTUMQ6P988 496 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 PSRC1Q6PGN9 363 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 TRIML1Q8N9V2 468 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 FTHL17Q9BXU8 183 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 HAPLN2Q9GZV7 340 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 TSPYL2Q9H2G4 693 aaPredicted RBP21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 RGS18Q9NS28 235 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 EXOC7Q9UPT5 735 aa21.94■■□□□ 1.1
SHKBP1-222ENST00000600320 ABHD14A-ACY1A0A1B0GW23 586 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 C9IYK1 514 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 HNRNPDLO14979 420 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 N4BP3O15049 544 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 TGFB1I1O43294 461 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 NPTXRO95502 500 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 NCBP1Q09161 790 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 C9orf50Q5SZB4 431 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 SYCP3Q8IZU3 236 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 GUF1Q8N442 669 aaKnown RBP21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 CCDC51Q96ER9 411 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 CDT1Q9H211 546 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 KCTD10Q9H3F6 313 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 TMEM206Q9H813 350 aa21.93■■□□□ 1.1
SHKBP1-222ENST00000600320 PPP1R3GB7ZBB8 358 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 ACTN1P12814 892 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 KNOP1Q1ED39 458 aaKnown RBP21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 ZNF568Q3ZCX4 644 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 COBLL1Q53SF7 1204 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 ZBTB33Q86T24 672 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 ADSSL1Q8N142 457 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 HERVK_113Q902F9 699 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 FAM105AQ9NUU6 356 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 CXXC1Q9P0U4 656 aaPredicted RBP21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 ANKFY1Q9P2R3 1169 aa21.92■■□□□ 1.1
SHKBP1-222ENST00000600320 TOM1L1O75674 476 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 HARSP12081 509 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 IBSPP21815 317 aaPredicted RBP21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 ADSSP30520 456 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 WDR5P61964 334 aaKnown RBP21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 DEFB103AP81534 67 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 SLC27A1Q6PCB7 646 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 MPZL3Q6UWV2 235 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 TRAIPQ9BWF2 469 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 GBP3Q9H0R5 595 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 SEMA6BQ9H3T3 888 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 C1orf112Q9NSG2 853 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 STYXL1Q9Y6J8 313 aa21.91■■□□□ 1.1
SHKBP1-222ENST00000600320 BAIAP3O94812 1187 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 ATF7P17544 494 aaPredicted RBP21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 NLRP12P59046 1061 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 FAM189BP81408 668 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 MCL1Q07820 350 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 SHHQ15465 462 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 DPCR1Q3MIW9 517 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 SLC24A5Q71RS6 500 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 ECHDC2Q86YB7 292 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 CEP120Q8N960 986 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 SMG8Q8ND04 991 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 CBWD1Q9BRT8 395 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 TCHPQ9BT92 498 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 GTPBP4Q9BZE4 634 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 UBE2OQ9C0C9 1292 aaKnown RBP21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 AGPAT3Q9NRZ7 376 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 HES2Q9Y543 173 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 PCDHB2Q9Y5E7 798 aa21.9■■□□□ 1.1
SHKBP1-222ENST00000600320 A0A0B4J269 797 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 A0A0U1RQF3 1178 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 ZBBXA8MT70 800 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 RASIP1Q5U651 963 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 FAM43BQ6ZT52 329 aaPredicted RBP21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 ZNF598Q86UK7 904 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 ADPGKQ9BRR6 497 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 NXF3Q9H4D5 531 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 TYW1Q9NV66 732 aaKnown RBP21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 IPPQ9Y573 584 aa21.89■■□□□ 1.09
SHKBP1-222ENST00000600320 PTPRSQ13332 1948 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 MEIS3P2A8K0S8 358 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 CLIC2O15247 247 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 CLDN3O15551 220 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 EFCAB14O75071 495 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 KIF20AO95235 890 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 MCF2P10911 925 aa21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 MATR3P43243 847 aaKnown RBP eCLIP21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 PMS1P54277 932 aaKnown RBP21.88■■□□□ 1.09
SHKBP1-222ENST00000600320 NOLC1Q14978 699 aaKnown RBP eCLIP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms