RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 ZC3H11AO75152 810 aaKnown RBP eCLIP8.8□□□□□ -1
CHMP2A-205ENST00000600006 TBX10O75333 385 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 NPTXRO95502 500 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 PLA2G4BP0C869 781 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 KCNA5P22460 613 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 LTBRP36941 435 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 MLH1P40692 756 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 UBA7P41226 1012 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 NPTX2P47972 431 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 AFF1P51825 1210 aaKnown RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 EFNA5P52803 228 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 PEX3P56589 373 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 ERVFC1P60507 584 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 DMP1Q13316 513 aaPredicted RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 PRPF4BQ13523 1007 aaKnown RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 ZRSR1Q15695 479 aaKnown RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 TMEM173Q86WV6 379 aaPredicted RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 CDR2LQ86X02 465 aaPredicted RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 EFHBQ8N7U6 833 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 CALML4Q96GE6 196 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 USP28Q96RU2 1077 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 TMEM175Q9BSA9 504 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 TRIM6Q9C030 488 aaPredicted RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 CCSER1Q9C0I3 900 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 RNF39Q9H2S5 420 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 POLD4Q9HCU8 107 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 TSHZ2Q9NRE2 1034 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 BLOC1S4Q9NUP1 217 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 ARHGAP28Q9P2N2 729 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 KANSL3Q9P2N6 904 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 DNAJB4Q9UDY4 337 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 PUF60Q9UHX1 559 aaKnown RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 FBXO2Q9UK22 296 aaPredicted RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 GIT1Q9Y2X7 761 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 HES2Q9Y543 173 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 PCDHGC5Q9Y5F6 944 aa8.8□□□□□ -1
CHMP2A-205ENST00000600006 PDCD11Q14690 1871 aaKnown RBP8.8□□□□□ -1
CHMP2A-205ENST00000600006 FSD2A1L4K1 749 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 ARL5CA6NH57 179 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 NT5C1B-RDH14C9J2C7 533 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 LINC01565O15544 149 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 DDHD2O94830 711 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 SSBP05455 408 aaKnown RBP eCLIP8.79□□□□□ -1
CHMP2A-205ENST00000600006 GALTP07902 379 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 PLCG1P19174 1290 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
CHMP2A-205ENST00000600006 SLC11A1P49279 550 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 NASPP49321 788 aaPredicted RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 ALDH7A1P49419 539 aaKnown RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 KRT17Q04695 432 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 RNASELQ05823 741 aaKnown RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 DSC1Q08554 894 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 DUSP6Q16828 381 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 DCAF4L1Q3SXM0 396 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 ARSHQ5FYA8 562 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 EEF1DP3Q658K8 133 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 TAS1R3Q7RTX0 852 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 ZNF280BQ86YH2 543 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 GSTCDQ8NEC7 633 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 BCL7CQ8WUZ0 217 aaPredicted RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 SPIRE2Q8WWL2 714 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 KCNN1Q92952 543 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 TMEM169Q96HH4 297 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 IGSF21Q96ID5 467 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 ZFP42Q96MM3 310 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 GAD1Q99259 594 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 PLIN2Q99541 437 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 CDCA3Q99618 268 aaPredicted RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 TCF25Q9BQ70 676 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 APOL6Q9BWW8 343 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 TMEM134Q9H6X4 195 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 NGRNQ9NPE2 291 aaKnown RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 KMT5AQ9NQR1 393 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 CLDND1Q9NY35 253 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 ODF2LQ9ULJ1 636 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 TNFSF13BQ9Y275 285 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 RBM19Q9Y4C8 960 aaKnown RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 SRPRBQ9Y5M8 271 aaKnown RBP8.79□□□□□ -1
CHMP2A-205ENST00000600006 CITO14578 2027 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 TRIP11Q15643 1979 aa8.79□□□□□ -1
CHMP2A-205ENST00000600006 CCDC169A6NNP5 214 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 H3BQ06 376 aaPredicted RBP8.78□□□□□ -1
CHMP2A-205ENST00000600006 K7ERI5 159 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 GLP2RO95838 553 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 POMCP01189 267 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 PLS3P13797 630 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 LIG1P18858 919 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 AKAP5P24588 427 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 MARCKSP29966 332 aaPredicted RBP8.78□□□□□ -1
CHMP2A-205ENST00000600006 NRIP1P48552 1158 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 SCNN1GP51170 649 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 DLX2Q07687 328 aaPredicted RBP8.78□□□□□ -1
CHMP2A-205ENST00000600006 GRIK3Q13003 919 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 ADAM15Q13444 863 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 KCNC3Q14003 757 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 SMC1AQ14683 1233 aaKnown RBP8.78□□□□□ -1
CHMP2A-205ENST00000600006 SLC39A14Q15043 492 aa8.78□□□□□ -1
CHMP2A-205ENST00000600006 KARSQ15046 597 aaKnown RBP8.78□□□□□ -1
CHMP2A-205ENST00000600006 PUS10Q3MIT2 529 aaKnown RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms