RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 MLH1P40692 756 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 POU5F1BQ06416 359 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 COASYQ13057 564 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 ADHFE1Q8IWW8 467 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 VPS52Q8N1B4 723 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 SMRP1Q8NCR6 262 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 MCPH1Q8NEM0 835 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 SNX29Q8TEQ0 813 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 IGSF21Q96ID5 467 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 GAD1Q99259 594 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 BHMT2Q9H2M3 363 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.24■□□□□ 0.03
SCAF1-203ENST00000598359 DDX19AQ9NUU7 478 aaKnown RBP15.24■□□□□ 0.03
SCAF1-203ENST00000598359 MIOSQ9NXC5 875 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 CDH22Q9UJ99 828 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 USP15Q9Y4E8 981 aaPredicted RBP15.24■□□□□ 0.03
SCAF1-203ENST00000598359 TRIOO75962 3097 aa15.24■□□□□ 0.03
SCAF1-203ENST00000598359 USP34Q70CQ2 3546 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 CNTNAP2Q9UHC6 1331 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 C19orf67A6NJJ6 358 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 H3BQV1 296 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 CXCL14O95715 111 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 EDN1P05305 212 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 CYP11B2P19099 503 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 AKAP5P24588 427 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 AXLP30530 894 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 SCNN1GP51170 649 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 NCBP1Q09161 790 aaKnown RBP15.23■□□□□ 0.03
SCAF1-203ENST00000598359 KCNC3Q14003 757 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 BECN1Q14457 450 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 SMC1AQ14683 1233 aaKnown RBP15.23■□□□□ 0.03
SCAF1-203ENST00000598359 HAUS3Q68CZ6 603 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
SCAF1-203ENST00000598359 IGSF22Q8N9C0 903 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 CDCA3Q99618 268 aaPredicted RBP15.23■□□□□ 0.03
SCAF1-203ENST00000598359 KIFC3Q9BVG8 833 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 NFKBIZQ9BYH8 718 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 ZBP1Q9H171 429 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 KLK14Q9P0G3 267 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 PRKAG3Q9UGI9 489 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 SMC3Q9UQE7 1217 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 KIF3AQ9Y496 699 aa15.23■□□□□ 0.03
SCAF1-203ENST00000598359 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 ARL5CA6NH57 179 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 E9PMD0 336 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 F8W810 466 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 CLASP2O75122 1294 aaKnown RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 SSBP05455 408 aaKnown RBP eCLIP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 PDIA5Q14554 519 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 PCBP1Q15365 356 aaKnown RBP eCLIP15.22■□□□□ 0.033e-8■■■□□ 17.5
SCAF1-203ENST00000598359 ZRSR1Q15695 479 aaKnown RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 CDCA2Q69YH5 1023 aaPredicted RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 DDX53Q86TM3 631 aaKnown RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 FBXL18Q96ME1 805 aa15.22■□□□□ 0.03
SCAF1-203ENST00000598359 FAM193BQ96PV7 902 aaPredicted RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 MMTAG2Q9BU76 263 aaKnown RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 TRIM6Q9C030 488 aaPredicted RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 PRG3Q9Y2Y8 225 aaPredicted RBP15.22■□□□□ 0.03
SCAF1-203ENST00000598359 NRP1O14786 923 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 ALADP13716 330 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 OR1G1P47890 313 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 ANKRD54Q6NXT1 300 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 KANK3Q6NY19 840 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 SLC27A1Q6PCB7 646 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 SYCE2Q6PIF2 218 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 DTHD1Q6ZMT9 781 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 KCNK18Q7Z418 384 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 ZBTB8OSQ8IWT0 167 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 CNNM3Q8NE01 707 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 RSPH1Q8WYR4 309 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 RABGGTAQ92696 567 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 PLIN2Q99541 437 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 S1PR5Q9H228 398 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 FZD8Q9H461 694 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 CACNG4Q9UBN1 327 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 FAN1Q9Y2M0 1017 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 HCFC2Q9Y5Z7 792 aa15.21■□□□□ 0.03
SCAF1-203ENST00000598359 CFAP54Q96N23 3096 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 A0A1B0GUA9 196 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 ALDH2P05091 517 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 PRKCBP05771 671 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 CTSAP10619 480 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 MCM2P49736 904 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 TMEM132AQ24JP5 1023 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 KRT79Q5XKE5 535 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 EEF1DP3Q658K8 133 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 TMEM184AQ6ZMB5 413 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 PPP4R3CPQ6ZMV5 832 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 TAS1R1Q7RTX1 841 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 COLGALT2Q8IYK4 626 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 C12orf76Q8N812 135 aaPredicted RBP15.2■□□□□ 0.02
SCAF1-203ENST00000598359 DEPTORQ8TB45 409 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 FEZF2Q8TBJ5 459 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 CCDC113Q9H0I3 377 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 KCNH6Q9H252 994 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 CXCL16Q9H2A7 254 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 PDZD7Q9H5P4 517 aa15.2■□□□□ 0.02
SCAF1-203ENST00000598359 UBN1Q9NPG3 1134 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms