RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CCDC127Q96BQ5 260 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 FBXL18Q96ME1 805 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 POP1Q99575 1024 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 NRBP2Q9NSY0 501 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 ADGRA2Q96PE1 1338 aa18.51■□□□□ 0.55
SHKBP1-216ENST00000598201 EVI5O60447 810 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 TACC1O75410 805 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 MARK3P27448 753 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 C17orf99Q6UX52 265 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 CEP112Q8N8E3 955 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 TRIM58Q8NG06 486 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 PARD3BQ8TEW8 1205 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 MAP7D2Q96T17 732 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 ANO9A1A5B4 782 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 TULP1O00294 542 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 P4HA2O15460 535 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 BUB1O43683 1085 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 N4BP1O75113 896 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 FERP16591 822 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 KLRC1P26715 233 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 DRP2Q13474 957 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 KCNV1Q6PIU1 500 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 ARHGEF19Q8IW93 802 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 BICD1Q96G01 975 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 NENFQ9UMX5 172 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 SAR1BQ9Y6B6 198 aa18.5■□□□□ 0.55
SHKBP1-216ENST00000598201 LRRIQ4A6NIV6 560 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 LRRIQ3A6PVS8 624 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 H2AFXP16104 143 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 ZSCAN20P17040 1043 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 RFC5P40937 340 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 MXI1P50539 228 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 ARHGAP44Q17R89 818 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 KIAA0753Q2KHM9 967 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 GOLGA1Q92805 767 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 MFSD14AQ96MC6 490 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 AZI2Q9H6S1 392 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 TOPORSQ9NS56 1045 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 NAGPAQ9UK23 515 aa18.49■□□□□ 0.55
SHKBP1-216ENST00000598201 H0YCG3 227 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 DDX3XO00571 662 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 LGR5O75473 907 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 GARTP22102 1010 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 NAMPTP43490 491 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 NAB2Q15742 525 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 FAM110CQ1W6H9 321 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 DHX37Q8IY37 1157 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 GLG1Q92896 1179 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 SPATA33Q96N06 139 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 MORF4L1Q9UBU8 362 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 FOXN3O00409 490 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 NOP56O00567 594 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 PMM2O15305 246 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 MAFO75444 373 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 EDN1P05305 212 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 TXNP10599 105 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 CYP24A1Q07973 514 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 ARMCX2Q7L311 632 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 GPD1LQ8N335 351 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 TXLNBQ8N3L3 684 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 DEPTORQ8TB45 409 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 SEMA4DQ92854 862 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 FAM213AQ9BRX8 229 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 HAPLN2Q9GZV7 340 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 UBE2TQ9NPD8 197 aaPredicted RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 LUC7LQ9NQ29 371 aaKnown RBP18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 JRKLQ9Y4A0 524 aa18.48■□□□□ 0.55
SHKBP1-216ENST00000598201 MYH10P35580 1976 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ZBTB42B2RXF5 422 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ZNF185O15231 689 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ADORA2AP29274 412 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 LIG4P49917 911 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 CETN1Q12798 172 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 CAPSQ13938 189 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ZNF792Q3KQV3 632 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ALKBH5Q6P6C2 394 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 RNF10Q8N5U6 811 aaKnown RBP18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 LNX1Q8TBB1 728 aaPredicted RBP18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 RABGGTAQ92696 567 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 KCNN1Q92952 543 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 KAT5Q92993 513 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 FAM84AQ96KN4 292 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 NOX5Q96PH1 765 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ARID3AQ99856 593 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 SYT11Q9BT88 431 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 PDCL3Q9H2J4 239 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 TSKSQ9UJT2 592 aa18.47■□□□□ 0.55
SHKBP1-216ENST00000598201 ASB14A6NK59 587 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 CCNA1P78396 465 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 STRN3Q13033 797 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 MKRN4PQ13434 485 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 TMC2Q8TDI7 906 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 BBXQ8WY36 941 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 ZBTB45Q96K62 511 aaPredicted RBP18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 ALS2CR12Q96Q35 445 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 KCNG1Q9UIX4 513 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 K7ERI5 159 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 ANXA13P27216 316 aa18.46■□□□□ 0.55
SHKBP1-216ENST00000598201 NAP1L1P55209 391 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms