RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 ERMP1Q7Z2K6 904 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 SRGAP1Q7Z6B7 1085 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 BLIDQ8IZY5 108 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 ZNF707Q96C28 371 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 AIFM3Q96NN9 605 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 JPH2Q9BR39 696 aaPredicted RBP18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 HERC2P3Q9BVR0 1158 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 EIF2AQ9BY44 585 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 DHX33Q9H6R0 707 aaKnown RBP18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 RXFP1Q9HBX9 757 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 EPS15L1Q9UBC2 864 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 VAV3Q9UKW4 847 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 CNTNAP2Q9UHC6 1331 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 OTOGLQ3ZCN5 2332 aa18.39■□□□□ 0.53
SHKBP1-215ENST00000597649 GBP2P32456 591 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 QARSP47897 775 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 RBM25P49756 843 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 MOXD1Q6UVY6 613 aa18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 RUFY3Q7L099 469 aa18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 CEP170P1Q96L14 293 aa18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 RHOBTB2Q9BYZ6 727 aa18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 ZSWIM6Q9HCJ5 1215 aa18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 BMP2KQ9NSY1 1161 aaPredicted RBP18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 DDX25Q9UHL0 483 aaKnown RBP18.38■□□□□ 0.53
SHKBP1-215ENST00000597649 STK25O00506 426 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 ZBTB39O15060 712 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 INPPL1O15357 1258 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 PAPLNO95428 1278 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 URODP06132 367 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 OR1G1P47890 313 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 DSC1Q08554 894 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 PPP2R5CQ13362 524 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 INF2Q27J81 1249 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 ST13P5Q8NFI4 369 aaPredicted RBP18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 PSPC1Q8WXF1 523 aaKnown RBP18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 SLC7A3Q8WY07 619 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 B3GALT6Q96L58 329 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 GAD1Q99259 594 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 CA14Q9ULX7 337 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 HES2Q9Y543 173 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 IPPQ9Y573 584 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 R4GN57 208 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 CLUHO75153 1309 aa18.37■□□□□ 0.53
SHKBP1-215ENST00000597649 ARL5CA6NH57 179 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 GLUD1P00367 558 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 ADH1AP07327 375 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 ITGA4P13612 1032 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 DSG1Q02413 1049 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 TOB2Q14106 344 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 CYP26C1Q6V0L0 522 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 PALB2Q86YC2 1186 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 RNF149Q8NC42 400 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 DAGLBQ8NCG7 672 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 RIN2Q8WYP3 895 aaPredicted RBP18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 SMG7Q92540 1137 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 ZFP42Q96MM3 310 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 LARP6Q9BRS8 491 aaKnown RBP18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 TBC1D17Q9HA65 648 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 KCNMB3Q9NPA1 279 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 CHST7Q9NS84 486 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 PDRG1Q9NUG6 133 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 RGL1Q9NZL6 768 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 DLGAP2Q9P1A6 1054 aa18.36■□□□□ 0.53
SHKBP1-215ENST00000597649 DOCK8Q8NF50 2099 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 P4HBP07237 508 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 DCNP07585 359 aaKnown RBP18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 GLUD2P49448 558 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 SCNN1GP51170 649 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 LILRA6Q6PI73 481 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 FERMT3Q86UX7 667 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 GPR152Q8TDT2 470 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 HAS1Q92839 578 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 CPB2Q96IY4 423 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 GPR62Q9BZJ7 368 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 UBN1Q9NPG3 1134 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 SSX2IPQ9Y2D8 614 aa18.35■□□□□ 0.53
SHKBP1-215ENST00000597649 CACNA1IQ9P0X4 2223 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 TGM5O43548 720 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 TSPAN1O60635 241 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 LMNAP02545 664 aaKnown RBP18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 SRFP11831 508 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 MLH1P40692 756 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 NEK4P51957 841 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 NONOQ15233 471 aaKnown RBP eCLIP18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 TRIM22Q8IYM9 498 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 CNNM3Q8NE01 707 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 GSTCDQ8NEC7 633 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 KCNG4Q8TDN1 519 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 STAMQ92783 540 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 RMDN1Q96DB5 314 aa18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 SLKQ9H2G2 1235 aaPredicted RBP18.34■□□□□ 0.53
SHKBP1-215ENST00000597649 ANHXE9PGG2 379 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 ASAP2O43150 1006 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 DEXIO95424 95 aa18.33■□□□□ 0.52
SHKBP1-215ENST00000597649 LAMP2P13473 410 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms