RNA–Protein interactions for RNA: ENST00000597598.1

SMG9-206, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG9, Length 1,077 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-206ENST00000597598 LSM14BQ9BX40 385 aaKnown RBP11.96□□□□□ -0.49
SMG9-206ENST00000597598 GCOM2Q9BZD3 368 aaPredicted RBP11.96□□□□□ -0.49
SMG9-206ENST00000597598 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.96□□□□□ -0.49
SMG9-206ENST00000597598 CNTNAP2Q9UHC6 1331 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 SRRM3A6NNA2 597 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 DDAH1O94760 285 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 FOSP01100 380 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 HNRNPA1P09651 372 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMG9-206ENST00000597598 SFPQP23246 707 aaKnown RBP eCLIP11.95□□□□□ -0.5
SMG9-206ENST00000597598 GNAQP50148 359 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 RING1Q06587 406 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 GRASPQ7Z6J2 395 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 SMAP1Q8IYB5 467 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 CTCFLQ8NI51 663 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 FAM193BQ96PV7 902 aaPredicted RBP11.95□□□□□ -0.5
SMG9-206ENST00000597598 PCDHB2Q9Y5E7 798 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 PCDHA10Q9Y5I2 948 aa11.95□□□□□ -0.5
SMG9-206ENST00000597598 IGLV3-22A0A075B6J6 115 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 FAM86B1E9PN63 330 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 TAF4O00268 1085 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 IPO5O00410 1097 aaKnown RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 ECI2O75521 394 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 PLEKHA8P1O95397 391 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 POU2F2P09086 479 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 FAM86B2P0C5J1 330 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 ZNF806P0C7X5 589 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 HOXA9P31269 272 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 SREBF1P36956 1147 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 NTHL1P78549 312 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 DSC1Q08554 894 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 SART3Q15020 963 aaKnown RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 TRMT1LQ7Z2T5 733 aaKnown RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 DNASE1L2Q92874 299 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 SCLT1Q96NL6 688 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 KXD1Q9BQD3 176 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 ANO3Q9BYT9 981 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 INO80BQ9C086 356 aaPredicted RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 RSAD1Q9HA92 442 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 HEBP1Q9NRV9 189 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 RXFP3Q9NSD7 469 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 TBC1D22BQ9NU19 505 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 GABBR1Q9UBS5 961 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 PIN4Q9Y237 131 aaKnown RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 PRG3Q9Y2Y8 225 aaPredicted RBP11.94□□□□□ -0.5
SMG9-206ENST00000597598 LAMA1P25391 3075 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 ITPR1Q14643 2758 aa11.94□□□□□ -0.5
SMG9-206ENST00000597598 SMG1Q96Q15 3661 aaKnown RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 AKAP13Q12802 2813 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 LOC400499M0QZD8 3231 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 IGKV6-21A0A0C4DH24 114 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 MAN2B1O00754 1011 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 ZNF862O60290 1169 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 PAPSS2O95340 614 aaPredicted RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 OATP04181 439 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 PSAPP07602 524 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 DRP2Q13474 957 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 TARBP2Q15633 366 aaKnown RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 AASDHQ4L235 1098 aaPredicted RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 STPG1Q5TH74 334 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 CENPQQ7L2Z9 268 aaPredicted RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 ZNF410Q86VK4 478 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 POTEDQ86YR6 584 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 NPAS3Q8IXF0 933 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 ZNF654Q8IZM8 581 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 FAM160A2Q8N612 972 aaPredicted RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 ITFG1Q8TB96 612 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 CRYGNQ8WXF5 182 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 GATA6Q92908 595 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 PGBD1Q96JS3 809 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 CEP89Q96ST8 783 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 RIC8AQ9NPQ8 531 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 NRBP2Q9NSY0 501 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 ZBTB47Q9UFB7 747 aaPredicted RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 FBXW11Q9UKB1 542 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 KCNH3Q9ULD8 1083 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 LHX6Q9UPM6 363 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 HELZ2Q9BYK8 2649 aaKnown RBP11.93□□□□□ -0.5
SMG9-206ENST00000597598 GREB1Q4ZG55 1949 aa11.93□□□□□ -0.5
SMG9-206ENST00000597598 SDK1Q7Z5N4 2213 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 A0A087WZ62 844 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 HIP1O00291 1037 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 POMCP01189 267 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 CYP21A2P08686 494 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 CXCL12P48061 93 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 ANTXR2P58335 489 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 SATB1Q01826 763 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 CREMQ03060 361 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 GAS6Q14393 721 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 SF3A2Q15428 464 aaKnown RBP11.92□□□□□ -0.5
SMG9-206ENST00000597598 USP41Q3LFD5 358 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 PLA2G4DQ86XP0 818 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 CMTR1Q8N1G2 835 aaKnown RBP11.92□□□□□ -0.5
SMG9-206ENST00000597598 LOXL4Q96JB6 756 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
SMG9-206ENST00000597598 GPR62Q9BZJ7 368 aa11.92□□□□□ -0.5
SMG9-206ENST00000597598 PLA2G2FQ9BZM2 168 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms