RNA–Protein interactions for RNA: ENST00000596014.5

PNKP-207, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-207ENST00000596014 SMAD3P84022 425 aaKnown RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 EHHADHQ08426 723 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 ATF7IP2Q5U623 682 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 SLC27A1Q6PCB7 646 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 ACO2Q99798 780 aaKnown RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 TARS2Q9BW92 718 aaKnown RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 STRA6Q9BX79 667 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 EIF2AQ9BY44 585 aaKnown RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 PDZD7Q9H5P4 517 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 LMBRD1Q9NUN5 540 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 LRFN2Q9ULH4 789 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 TLL1O43897 1013 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 PPP1R37O75864 691 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 EOMESO95936 686 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 ATF7P17544 494 aaPredicted RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 PBX2P40425 430 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 RAB27AP51159 221 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 DPYDQ12882 1025 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 ZNF598Q86UK7 904 aaKnown RBP21.21■□□□□ 0.99
PNKP-207ENST00000596014 RAD9AQ99638 391 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 PBX4Q9BYU1 374 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 TNFSF13BQ9Y275 285 aa21.21■□□□□ 0.99
PNKP-207ENST00000596014 N4BP3O15049 544 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 KINO60870 393 aaKnown RBP21.2■□□□□ 0.98
PNKP-207ENST00000596014 DGKIO75912 1065 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 GCNT3O95395 438 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 CASP5P51878 434 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 HTRA4P83105 476 aaPredicted RBP21.2■□□□□ 0.98
PNKP-207ENST00000596014 POSTNQ15063 836 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 EEF1DP3Q658K8 133 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 RNF169Q8NCN4 708 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 FGFBP2Q9BYJ0 223 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 INSL6Q9Y581 213 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 PCDHB13Q9Y5F0 798 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 PCDHA11Q9Y5I1 949 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 SZT2Q5T011 3432 aa21.2■□□□□ 0.98
PNKP-207ENST00000596014 SOX1O00570 391 aaPredicted RBP21.19■□□□□ 0.98
PNKP-207ENST00000596014 MYBP10242 640 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 MYOGP15173 224 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 FAM26FQ5R3K3 315 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 ZPBP2Q6X784 338 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 MRPL10Q7Z7H8 261 aaKnown RBP21.19■□□□□ 0.98
PNKP-207ENST00000596014 PTPRHQ9HD43 1115 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 CHD9Q3L8U1 2897 aa21.19■□□□□ 0.98
PNKP-207ENST00000596014 FNDC1Q4ZHG4 1894 aaPredicted RBP21.19■□□□□ 0.98
PNKP-207ENST00000596014 NPTXRO95502 500 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 RPN1P04843 607 aaKnown RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 PNOCQ13519 176 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 RAB30Q15771 203 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 KMT5BQ4FZB7 885 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 MAP4K3Q8IVH8 894 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 ELOA2Q8IYF1 753 aaPredicted RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 SMG8Q8ND04 991 aaKnown RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 GLIS3Q8NEA6 775 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 HVCN1Q96D96 273 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 YME1L1Q96TA2 773 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 ADPGKQ9BRR6 497 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 TRIM6Q9C030 488 aaPredicted RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 MSRAQ9UJ68 235 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 IPPQ9Y573 584 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 FGFR1P11362 822 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 PROZP22891 400 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 ALCAMQ13740 583 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 SKOR2Q2VWA4 1001 aaPredicted RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 LPPQ93052 612 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 ZNF689Q96CS4 500 aaPredicted RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 PGBD4Q96DM1 585 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 BICD1Q96G01 975 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 TCHPQ9BT92 498 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 RC3H2Q9HBD1 1191 aaKnown RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 HOOK1Q9UJC3 728 aaKnown RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 YBX2Q9Y2T7 364 aaKnown RBP21.18■□□□□ 0.98
PNKP-207ENST00000596014 HES2Q9Y543 173 aa21.18■□□□□ 0.98
PNKP-207ENST00000596014 MEIS3P2A8K0S8 358 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 HNRNPDLO14979 420 aaKnown RBP21.17■□□□□ 0.98
PNKP-207ENST00000596014 TOM1L1O75674 476 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 PIGRP01833 764 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 GATMP50440 423 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 KCNA1Q09470 495 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 ZBTB45Q96K62 511 aaPredicted RBP21.17■□□□□ 0.98
PNKP-207ENST00000596014 RNF19AQ9NV58 838 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 EXOC1Q9NV70 894 aa21.17■□□□□ 0.98
PNKP-207ENST00000596014 LCHNA4D1U4 455 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 ABLIM1O14639 778 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 PRPF6O94906 941 aaKnown RBP21.16■□□□□ 0.98
PNKP-207ENST00000596014 DNAJB2P25686 324 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 LIG4P49917 911 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 PSMD2Q13200 908 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 DCAF4L1Q3SXM0 396 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 ZNF568Q3ZCX4 644 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 CLLU1OSQ5K130 101 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 L1TD1Q5T7N2 865 aaKnown RBP21.16■□□□□ 0.98
PNKP-207ENST00000596014 MPZL3Q6UWV2 235 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 STXBP4Q6ZWJ1 553 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 EPM2AIP1Q7L775 607 aaPredicted RBP21.16■□□□□ 0.98
PNKP-207ENST00000596014 LRCH3Q96II8 777 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 ACCSQ96QU6 501 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 RNF39Q9H2S5 420 aa21.16■□□□□ 0.98
PNKP-207ENST00000596014 NXF3Q9H4D5 531 aaKnown RBP21.16■□□□□ 0.98
PNKP-207ENST00000596014 SLC39A2Q9NP94 309 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms