RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 PHKA2P46019 1235 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 ACLYP53396 1101 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 CCDC173Q0VFZ6 552 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 CEP135Q66GS9 1140 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 IRF2BP1Q8IU81 584 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 MAP4K3Q8IVH8 894 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 DRC7Q8IY82 874 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 KIAA0319LQ8IZA0 1049 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 NME8Q8N427 588 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 KCNN1Q92952 543 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 EEF2KMTQ96G04 330 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 CNOT6LQ96LI5 555 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 GLT1D1Q96MS3 346 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 SCLT1Q96NL6 688 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 XPO4Q9C0E2 1151 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 FAM49AQ9H0Q0 323 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 AGPAT3Q9NRZ7 376 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 ADGRA3Q8IWK6 1321 aa14.29□□□□□ -0.12
SHKBP1-209ENST00000595803 A0A087WZ62 844 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 TRIM43BA6NCK2 446 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 LRRC10BA6NIK2 292 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 VTNP04004 478 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 LIG4P49917 911 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 COPB1P53618 953 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 PTENP60484 403 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ADAM17P78536 824 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ZNF200P98182 395 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ITGA7Q13683 1181 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 KRT31Q15323 416 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 MAPK6Q16659 721 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ARMCX5Q6P1M9 558 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 LRRC55Q6ZSA7 311 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 SLC9A9Q8IVB4 645 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ZC3H3Q8IXZ2 948 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 NLRP7Q8WX94 980 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 TRIM43Q96BQ3 446 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 TIFAQ96CG3 184 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 NAP1L5Q96NT1 182 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 FDXACB1Q9BRP7 624 aaPredicted RBP14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 VPS16Q9H269 839 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 IKZF4Q9H2S9 585 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 TAB2Q9NYJ8 693 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 GTF2IRD1Q9UHL9 959 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 FRMD4BQ9Y2L6 1034 aa14.28□□□□□ -0.12
SHKBP1-209ENST00000595803 EVPLQ92817 2033 aa14.27□□□□□ -0.12
SHKBP1-209ENST00000595803 ZMYM2Q9UBW7 1377 aa14.27□□□□□ -0.12
SHKBP1-209ENST00000595803 KBTBD13C9JR72 458 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 ANKRD63C9JTQ0 380 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 INO80B-WBP1J3KQ70 363 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 N4BP3O15049 544 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 EXOC3O60645 756 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 PRKCBP05771 671 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 EPB41P11171 864 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 PSMC2P35998 433 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 CYP2J2P51589 502 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 EPHB4P54760 987 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 NLRP11P59045 1033 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 PTPN11Q06124 597 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 HIC1Q14526 733 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 CCDC85BQ15834 202 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 TMEM132AQ24JP5 1023 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 CDCA2Q69YH5 1023 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 SLFN12LQ6IEE8 588 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 SLC39A5Q6ZMH5 540 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 RUFY4Q6ZNE9 571 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 TAS1R3Q7RTX0 852 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 RSPH3Q86UC2 560 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 ZNF410Q86VK4 478 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 SESTD1Q86VW0 696 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 C12orf56Q8IXR9 622 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 ZNF710Q8N1W2 664 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 DNAJB3Q8WWF6 145 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 MRFAP1L1Q96HT8 127 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 PPP1R16BQ96T49 567 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 TUBGCP2Q9BSJ2 902 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 NOC4LQ9BVI4 516 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 MRPL4Q9BYD3 311 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 NFKBIZQ9BYH8 718 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 GCOM2Q9BZD3 368 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 INO80BQ9C086 356 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 PCIF1Q9H4Z3 704 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 METTL14Q9HCE5 456 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 DMAC2Q9NW81 257 aa14.27□□□□□ -0.13
SHKBP1-209ENST00000595803 TCF20Q9UGU0 1960 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 PES1O00541 588 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 ACKR2O00590 384 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 HNRNPDLO14979 420 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 SLC16A3O15427 465 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 PRKCSHP14314 528 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 GARTP22102 1010 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 MATR3P43243 847 aaKnown RBP eCLIP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 GPC3P51654 580 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 HSP90AA2PQ14568 343 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 NR1I3Q14994 352 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 SNX17Q15036 470 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 TMEM31Q5JXX7 168 aa14.26□□□□□ -0.13
SHKBP1-209ENST00000595803 GDF6Q6KF10 455 aaPredicted RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms