RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 CATSPER4Q7RTX7 472 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 GRASPQ7Z6J2 395 aaPredicted RBP15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 MICU3Q86XE3 530 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 PGBD4Q96DM1 585 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 TMEM175Q9BSA9 504 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 RSAD1Q9HA92 442 aa15.46■□□□□ 0.07
SHKBP1-208ENST00000595726 CNTNAP5Q8WYK1 1306 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 MIA3Q5JRA6 1907 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 DOCK6Q96HP0 2047 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 SLC30A4O14863 429 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 PAPLNO95428 1278 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 EFEMP2O95967 443 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 CYP3A4P08684 503 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 TARSP26639 723 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 MCM5P33992 734 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 PRKCQQ04759 706 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 MTERF2Q49AM1 385 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 ZBTB41Q5SVQ8 909 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 LILRA6Q6PI73 481 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 MRPL10Q7Z7H8 261 aaKnown RBP15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 RHPN2Q8IUC4 686 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 TMEM87BQ96K49 555 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 PLEKHA4Q9H4M7 779 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 DISC1Q9NRI5 854 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 ZDHHC7Q9NXF8 308 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 SUCLA2Q9P2R7 463 aaPredicted RBP15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 GMEB2Q9UKD1 530 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 SSX2IPQ9Y2D8 614 aa15.45■□□□□ 0.06
SHKBP1-208ENST00000595726 CNOT1A5YKK6 2376 aaKnown RBP15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 LAMA1P25391 3075 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 WDR64B1ANS9 1081 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 CHMP2AO43633 222 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 GDF9O60383 454 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 CENPBP07199 599 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 LIFRP42702 1097 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 RAB27AP51159 221 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 DSG1Q02413 1049 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 FUT2Q10981 343 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 UBXN11Q5T124 520 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 PPP1R18Q6NYC8 613 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 COLGALT2Q8IYK4 626 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 RNF168Q8IYW5 571 aaPredicted RBP15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 HDAC7Q8WUI4 952 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 GJA10Q969M2 543 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 CLDN23Q96B33 292 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 NLRP4Q96MN2 994 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 KXD1Q9BQD3 176 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 OSBPL6Q9BZF3 934 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 BARHL2Q9NY43 387 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 KANSL3Q9P2N6 904 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 CDH7Q9ULB5 785 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 PATJQ8NI35 1801 aa15.44■□□□□ 0.06
SHKBP1-208ENST00000595726 ZMYND10O75800 440 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 MTAPQ13126 283 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 FZD5Q13467 585 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 TPRG1Q6ZUI0 275 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 ITFG1Q8TB96 612 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 RABGGTAQ92696 567 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 FGF13Q92913 245 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 INO80BQ9C086 356 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 RNF39Q9H2S5 420 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 CHST7Q9NS84 486 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 FAM217BQ9NTX9 383 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 MIOSQ9NXC5 875 aa15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 SEPT9Q9UHD8 586 aaPredicted RBP15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 FASNP49327 2511 aaKnown RBP15.43■□□□□ 0.06
SHKBP1-208ENST00000595726 NBEAQ8NFP9 2946 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 IGKV6-21A0A0C4DH24 114 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 STBD1O95210 358 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 DNM2P50570 870 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 CDC42EP1Q00587 391 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 ERICH6BQ5W0A0 696 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 NETO1Q8TDF5 533 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 LENG9Q96B70 501 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 MTA3Q9BTC8 594 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 UNC45AQ9H3U1 944 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 IFT122Q9HBG6 1241 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 PRMT8Q9NR22 394 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 AGPAT5Q9NUQ2 364 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 PPP4R2Q9NY27 417 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 ZFP37Q9Y6Q3 630 aaPredicted RBP15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 MYH15Q9Y2K3 1946 aa15.42■□□□□ 0.06
SHKBP1-208ENST00000595726 SHISA7A6NL88 538 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 SETQ01105 290 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 RNF20Q5VTR2 975 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 ZNF410Q86VK4 478 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 SMG8Q8ND04 991 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 GAD1Q99259 594 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 NIFKQ9BYG3 293 aaKnown RBP15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 MINDY3Q9H8M7 445 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 SH2B1Q9NRF2 756 aaPredicted RBP15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 ANGPTL2Q9UKU9 493 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 RAB23Q9ULC3 237 aa15.41■□□□□ 0.06
SHKBP1-208ENST00000595726 ARL5CA6NH57 179 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 MSH4O15457 936 aa15.4■□□□□ 0.06
SHKBP1-208ENST00000595726 CCL16O15467 120 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms