RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 CNGA4Q8IV77 575 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 TC2NQ8N9U0 490 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 FDXACB1Q9BRP7 624 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 MRPL4Q9BYD3 311 aaKnown RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 INO80BQ9C086 356 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 HAPLN2Q9GZV7 340 aa16.56■□□□□ 0.24
VRK3-207ENST00000594092 FAM49AQ9H0Q0 323 aaPredicted RBP16.56■□□□□ 0.24
VRK3-207ENST00000594092 TREHO43280 583 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 ADRB2P07550 413 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 NLRP11P59045 1033 aaKnown RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 BFSP1Q12934 665 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
VRK3-207ENST00000594092 SNRNP35Q16560 246 aaKnown RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 NBPF20Q3BBV1 942 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 SLFN12LQ6IEE8 588 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 INTS8Q75QN2 995 aaKnown RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 CBWD2Q8IUF1 395 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 ACO2Q99798 780 aaKnown RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 CEP350Q5VT06 3117 aa16.55■□□□□ 0.24
VRK3-207ENST00000594092 TRIP12Q14669 1992 aaPredicted RBP16.55■□□□□ 0.24
VRK3-207ENST00000594092 ACKR2O00590 384 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 MFAP3LO75121 409 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 MYCNP04198 464 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 IQCF3P0C7M6 154 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 TRIM49P0CI25 452 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 TRIM49CP0CI26 452 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 GNAT1P11488 350 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 KRT13P13646 458 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 CASP14P31944 242 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 KCNMA1Q12791 1236 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 ZNF410Q86VK4 478 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 GPD1LQ8N335 351 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 PLEKHO2Q8TD55 490 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 NLRP7Q8WX94 980 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 CCDC51Q96ER9 411 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 PCMTD1Q96MG8 357 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 PANX2Q96RD6 677 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 TMX1Q9H3N1 280 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 HMX1Q9NP08 348 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 AGO2Q9UKV8 859 aaKnown RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 A0A0B4J269 797 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 KIAA0391O15091 583 aaKnown RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 EXTL3O43909 919 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 CSDE1O75534 798 aaKnown RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 TOM1L1O75674 476 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 FXR1P51114 621 aaKnown RBP eCLIP16.54■□□□□ 0.24
VRK3-207ENST00000594092 VAMP7P51809 220 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 MCCD1P59942 119 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 FAM187BQ17R55 369 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 LHX8Q68G74 356 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 RNF180Q86T96 592 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 C17orf53Q8N3J3 647 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 PCSK9Q8NBP7 692 aaKnown RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 BAG1Q99933 345 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 NUP58Q9BVL2 599 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 ADAMTS10Q9H324 1103 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 SPTLC3Q9NUV7 552 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 PRMT7Q9NVM4 692 aaPredicted RBP16.54■□□□□ 0.24
VRK3-207ENST00000594092 ANKFY1Q9P2R3 1169 aa16.54■□□□□ 0.24
VRK3-207ENST00000594092 TTC26A0AVF1 554 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 B4GALT5O43286 388 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 GPR32O75388 356 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 CDC42EP1Q00587 391 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
VRK3-207ENST00000594092 AMHR2Q16671 573 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 TSHZ1Q6ZSZ6 1077 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 SH3TC2Q8TF17 1288 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 DNAJB3Q8WWF6 145 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 MFSD14AQ96MC6 490 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 SCLT1Q96NL6 688 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 FAM213AQ9BRX8 229 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 CRACR2AQ9BSW2 395 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 MMRN2Q9H8L6 949 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 KIAA1586Q9HCI6 787 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 GTF2IRD1Q9UHL9 959 aa16.53■□□□□ 0.24
VRK3-207ENST00000594092 ABLIM1O14639 778 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 CLDN3O15551 220 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 TRIM21P19474 475 aaKnown RBP16.52■□□□□ 0.24
VRK3-207ENST00000594092 MATR3P43243 847 aaKnown RBP eCLIP16.52■□□□□ 0.24
VRK3-207ENST00000594092 KCNJ6P48051 423 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 FMO5P49326 533 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 DLG4P78352 724 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 CYP24A1Q07973 514 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 TMEM62Q0P6H9 643 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 FIGNQ5HY92 759 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 C1orf220Q5T0J3 134 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 IQCDQ96DY2 449 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 MSTO1Q9BUK6 570 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 PTPRHQ9HD43 1115 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 CAPN11Q9UMQ6 739 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 PTPN22Q9Y2R2 807 aa16.52■□□□□ 0.24
VRK3-207ENST00000594092 ZNF233A6NK53 670 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 EPHB6O15197 1021 aa16.52■□□□□ 0.23
VRK3-207ENST00000594092 STX10O60499 249 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms