RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 LAG3P18627 525 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 ZNF131P52739 623 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 GIT2Q14161 759 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 NOMO2Q5JPE7 1267 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 NT5DC1Q5TFE4 455 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 HACE1Q8IYU2 909 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 PDILTQ8N807 584 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 TMEM161BQ8NDZ6 487 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 P2RX5Q93086 422 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 PANK2Q9BZ23 570 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 RSAD1Q9HA92 442 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 PARVGQ9HBI0 331 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 AAASQ9NRG9 546 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 LMCD1Q9NZU5 365 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 INPP5FQ9Y2H2 1132 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 HES2Q9Y543 173 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 TRANK1O15050 2925 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 PLXNA4Q9HCM2 1894 aa16.03■□□□□ 0.16
VRK3-206ENST00000594090 TBCAO75347 108 aaKnown RBP16.02■□□□□ 0.16
VRK3-206ENST00000594090 OFD1O75665 1012 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 ITGA4P13612 1032 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 SMTNP53814 917 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 NCKAP1LP55160 1127 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 EEF1DP3Q658K8 133 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 SV2BQ7L1I2 683 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 MICALL1Q8N3F8 863 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 COLGALT1Q8NBJ5 622 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
VRK3-206ENST00000594090 ADPGKQ9BRR6 497 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 RNF39Q9H2S5 420 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 KCNG1Q9UIX4 513 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 PCDHB12Q9Y5F1 795 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 ATG2AQ2TAZ0 1938 aa16.02■□□□□ 0.16
VRK3-206ENST00000594090 ITGB1P05556 798 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 MAPTP10636 758 aaKnown RBP16.02■□□□□ 0.15
VRK3-206ENST00000594090 NUCB2P80303 420 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 E2F4Q16254 413 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 ATF7IP2Q5U623 682 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 RESP18Q5W5W9 173 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 DYMQ7RTS9 669 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 MYCT1Q8N699 235 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 KLHL23Q8NBE8 558 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 URGCPQ8TCY9 931 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 DDX12PQ92771 950 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 MRPL38Q96DV4 380 aaKnown RBP16.02■□□□□ 0.15
VRK3-206ENST00000594090 SPATA32Q96LK8 384 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 APOL6Q9BWW8 343 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 MRPL4Q9BYD3 311 aaKnown RBP16.02■□□□□ 0.15
VRK3-206ENST00000594090 LMAN2LQ9H0V9 348 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 UBN1Q9NPG3 1134 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 PLAGL2Q9UPG8 496 aa16.02■□□□□ 0.15
VRK3-206ENST00000594090 MYMKA6NI61 221 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 H0YCG3 227 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 GRM6O15303 877 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 MLH1P40692 756 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 AFF1P51825 1210 aaKnown RBP16.01■□□□□ 0.15
VRK3-206ENST00000594090 STRN3Q13033 797 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 CCDC85BQ15834 202 aaPredicted RBP16.01■□□□□ 0.15
VRK3-206ENST00000594090 PTPROQ16827 1216 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 CSPP1Q1MSJ5 1256 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 DCAF4L1Q3SXM0 396 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 PPM1EQ8WY54 764 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 KCNN1Q92952 543 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 DHX58Q96C10 678 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 ZNF558Q96NG5 402 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 ACO2Q99798 780 aaKnown RBP16.01■□□□□ 0.15
VRK3-206ENST00000594090 TARS2Q9BW92 718 aaKnown RBP16.01■□□□□ 0.15
VRK3-206ENST00000594090 ZHX3Q9H4I2 956 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 TNFSF13BQ9Y275 285 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 GIT1Q9Y2X7 761 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 TCHHQ07283 1943 aa16.01■□□□□ 0.15
VRK3-206ENST00000594090 ZMYM2Q9UBW7 1377 aa16■□□□□ 0.15
VRK3-206ENST00000594090 REV3LO60673 3130 aa16■□□□□ 0.15
VRK3-206ENST00000594090 ARL5CA6NH57 179 aa16■□□□□ 0.15
VRK3-206ENST00000594090 K7ENM7 598 aa16■□□□□ 0.15
VRK3-206ENST00000594090 INPPL1O15357 1258 aa16■□□□□ 0.15
VRK3-206ENST00000594090 TRAK2O60296 914 aa16■□□□□ 0.15
VRK3-206ENST00000594090 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
VRK3-206ENST00000594090 AKAP5P24588 427 aa16■□□□□ 0.15
VRK3-206ENST00000594090 PBX3P40426 434 aa16■□□□□ 0.15
VRK3-206ENST00000594090 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
VRK3-206ENST00000594090 KCNT2Q6UVM3 1135 aa16■□□□□ 0.15
VRK3-206ENST00000594090 FAM178BQ8IXR5 827 aa16■□□□□ 0.15
VRK3-206ENST00000594090 THNSL1Q8IYQ7 743 aa16■□□□□ 0.15
VRK3-206ENST00000594090 DNAJC19Q96DA6 116 aa16■□□□□ 0.15
VRK3-206ENST00000594090 FIZ1Q96SL8 496 aa16■□□□□ 0.15
VRK3-206ENST00000594090 GAD1Q99259 594 aa16■□□□□ 0.15
VRK3-206ENST00000594090 SCAND2PQ9GZW5 306 aaPredicted RBP16■□□□□ 0.15
VRK3-206ENST00000594090 CUEDC2Q9H467 287 aa16■□□□□ 0.15
VRK3-206ENST00000594090 NRDE2Q9H7Z3 1164 aa16■□□□□ 0.15
VRK3-206ENST00000594090 ALG13Q9NP73 1137 aaKnown RBP16■□□□□ 0.15
VRK3-206ENST00000594090 FAM13BQ9NYF5 915 aa16■□□□□ 0.15
VRK3-206ENST00000594090 KANSL3Q9P2N6 904 aa16■□□□□ 0.15
VRK3-206ENST00000594090 PRUNE2Q8WUY3 3088 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 POLR2DO15514 142 aaKnown RBP15.99■□□□□ 0.15
VRK3-206ENST00000594090 FGF18O76093 207 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 POMCP01189 267 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 SCP2P22307 547 aa15.99■□□□□ 0.15
VRK3-206ENST00000594090 PPM1AP35813 382 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms