RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 LINC01565O15544 149 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 SLC26A4O43511 780 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 NPTXRO95502 500 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 PRKCBP05771 671 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 GUCY2CP25092 1073 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 LONP1P36776 959 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 NPTX2P47972 431 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 KRT17Q04695 432 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 RNASELQ05823 741 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 DLX2Q07687 328 aaPredicted RBP20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 ADAM15Q13444 863 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 PDE12Q6L8Q7 609 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 URGCPQ8TCY9 931 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 MICAL1Q8TDZ2 1067 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 IGFLR1Q9H665 355 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 MIOSQ9NXC5 875 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 KANSL3Q9P2N6 904 aa20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 PUF60Q9UHX1 559 aaKnown RBP20.41■□□□□ 0.86
SHKBP1-202ENST00000593764 ARL5CA6NH57 179 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 H3BQ06 376 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 POMCP01189 267 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 PLA2G4BP0C869 781 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 UBA7P41226 1012 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 SLC11A1P49279 550 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 EFNA5P52803 228 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 PEX3P56589 373 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 PRPF4BQ13523 1007 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 ARSHQ5FYA8 562 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 RBM23Q86U06 439 aaKnown RBP20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 HSCBQ8IWL3 235 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 BCL7CQ8WUZ0 217 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 CDK5RAP3Q96JB5 506 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 ZFP42Q96MM3 310 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 GAD1Q99259 594 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 TRIM6Q9C030 488 aaPredicted RBP20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 GBP3Q9H0R5 595 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 PDZD7Q9H5P4 517 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 GIT1Q9Y2X7 761 aa20.4■□□□□ 0.86
SHKBP1-202ENST00000593764 SFI1A8K8P3 1242 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 SSBP05455 408 aaKnown RBP eCLIP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 LIG1P18858 919 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 AKAP5P24588 427 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 MARCKSP29966 332 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 MLH1P40692 756 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 NRIP1P48552 1158 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 NT5DC1Q5TFE4 455 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 EP400NLQ6ZTU2 488 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 TAS1R3Q7RTX0 852 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 EFHBQ8N7U6 833 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 GSTCDQ8NEC7 633 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 PPP2R3CQ969Q6 453 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 IGSF21Q96ID5 467 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 DRC1Q96MC2 740 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 NECAB3Q96P71 396 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 UHRF1Q96T88 793 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 TCF25Q9BQ70 676 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 TIPINQ9BVW5 301 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 APOL6Q9BWW8 343 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 ZSCAN16Q9H4T2 348 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 BLOC1S4Q9NUP1 217 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 FBXO2Q9UK22 296 aaPredicted RBP20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 C5orf42Q9H799 3197 aa20.39■□□□□ 0.85
SHKBP1-202ENST00000593764 CCDC169A6NNP5 214 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 HIDE1A8MVS5 230 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 N4BP3O15049 544 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 PER2O15055 1255 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 TBX10O75333 385 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 RAD51AP2Q09MP3 1159 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 PLPP4Q5VZY2 271 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 EEF1DP3Q658K8 133 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 USP49Q70CQ1 688 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 CALML4Q96GE6 196 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 EPSTI1Q96J88 318 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 USP28Q96RU2 1077 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 NTPCRQ9BSD7 190 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 CCSER1Q9C0I3 900 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 TLE6Q9H808 572 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 C17orf75Q9HAS0 396 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 NGRNQ9NPE2 291 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 KCND2Q9NZV8 630 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 ARHGAP28Q9P2N2 729 aa20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 SRPRBQ9Y5M8 271 aaKnown RBP20.38■□□□□ 0.85
SHKBP1-202ENST00000593764 NPHP3-ACAD11A0A0J9YXS1 232 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 CARNS1A5YM72 827 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 GRXCR2A6NFK2 248 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 K7ERI5 159 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 GLP2RO95838 553 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 ALDH2P05091 517 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 PLCG1P19174 1290 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 SCNN1GP51170 649 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 CEBPZQ03701 1054 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 DSC1Q08554 894 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 DMP1Q13316 513 aaPredicted RBP20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 KARSQ15046 597 aaKnown RBP20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 SPECC1Q5M775 1068 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 TMC7Q7Z402 723 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 COLGALT2Q8IYK4 626 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 HACE1Q8IYU2 909 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 TMEM169Q96HH4 297 aa20.37■□□□□ 0.85
SHKBP1-202ENST00000593764 CLIC6Q96NY7 704 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms