RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 ST3GAL1Q11201 340 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 XKR9Q5GH70 373 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 ASTLQ6HA08 431 aaPredicted RBP16.43■□□□□ 0.22
PNKP-202ENST00000593706 PPP4R3AQ6IN85 833 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 ELMSAN1Q6PJG2 1045 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 PIK3AP1Q6ZUJ8 805 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 OTUD6AQ7L8S5 288 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 MRPL10Q7Z7H8 261 aaKnown RBP16.43■□□□□ 0.22
PNKP-202ENST00000593706 GPR149Q86SP6 731 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 POTEDQ86YR6 584 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 FLCNQ8NFG4 579 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 KLHL5Q96PQ7 755 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 MTRQ99707 1265 aa16.43■□□□□ 0.22
PNKP-202ENST00000593706 PRG3Q9Y2Y8 225 aaPredicted RBP16.43■□□□□ 0.22
PNKP-202ENST00000593706 ZNF292O60281 2723 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 NRP1O14786 923 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 TBX3O15119 743 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 ASAP2O43150 1006 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 SOD2P04179 222 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 OR1G1P47890 313 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 EPHA7Q15375 998 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 UBXN11Q5T124 520 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 CNNM3Q8NE01 707 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 FEZF2Q8TBJ5 459 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 CCDC43Q96MW1 224 aaKnown RBP16.42■□□□□ 0.22
PNKP-202ENST00000593706 UBN1Q9NPG3 1134 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 MAN1C1Q9NR34 630 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 SSX2IPQ9Y2D8 614 aa16.42■□□□□ 0.22
PNKP-202ENST00000593706 DCHS1Q96JQ0 3298 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 BAG4O95429 457 aaKnown RBP16.41■□□□□ 0.22
PNKP-202ENST00000593706 ADH1AP07327 375 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 NCLP19338 710 aaKnown RBP16.41■□□□□ 0.22
PNKP-202ENST00000593706 HOXA11P31270 313 aaPredicted RBP16.41■□□□□ 0.22
PNKP-202ENST00000593706 MLH1P40692 756 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 NEK4P51957 841 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 NCBP1Q09161 790 aaKnown RBP16.41■□□□□ 0.22
PNKP-202ENST00000593706 NOTUMQ6P988 496 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 C15orf39Q6ZRI6 1047 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 SLFN12Q8IYM2 578 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 NECAB1Q8N987 351 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 DYDC2Q96IM9 177 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 HERC2P3Q9BVR0 1158 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 TRIM6Q9C030 488 aaPredicted RBP16.41■□□□□ 0.22
PNKP-202ENST00000593706 ZSWIM4Q9H7M6 989 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 GJB4Q9NTQ9 266 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 DPP7Q9UHL4 492 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 FBXL21Q9UKT6 434 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 IPPQ9Y573 584 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 GVINP1Q7Z2Y8 2422 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 VWA8A3KMH1 1905 aa16.41■□□□□ 0.22
PNKP-202ENST00000593706 DMXL1Q9Y485 3027 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 ARL5CA6NH57 179 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 INO80B-WBP1J3KQ70 363 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 TSPAN1O60635 241 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 NR1I2O75469 434 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 GLUD2P49448 558 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 CLCN5P51795 746 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 TDGQ13569 410 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 TFDP1Q14186 410 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 CTTNQ14247 550 aaKnown RBP16.4■□□□□ 0.22
PNKP-202ENST00000593706 MXD4Q14582 209 aaPredicted RBP16.4■□□□□ 0.22
PNKP-202ENST00000593706 TPH2Q8IWU9 490 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 SMG8Q8ND04 991 aaKnown RBP16.4■□□□□ 0.22
PNKP-202ENST00000593706 NSUN7Q8NE18 718 aaKnown RBP16.4■□□□□ 0.22
PNKP-202ENST00000593706 OXER1Q8TDS5 423 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 HAS1Q92839 578 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 CCDC51Q96ER9 411 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 CPB2Q96IY4 423 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 APOL6Q9BWW8 343 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 EIF2AQ9BY44 585 aaKnown RBP16.4■□□□□ 0.22
PNKP-202ENST00000593706 MARCH5Q9NX47 278 aa16.4■□□□□ 0.22
PNKP-202ENST00000593706 GLUD1P00367 558 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 AXLP30530 894 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 GBP2P32456 591 aaPredicted RBP16.39■□□□□ 0.21
PNKP-202ENST00000593706 SCNN1GP51170 649 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 PCBP1Q15365 356 aaKnown RBP eCLIP16.39■□□□□ 0.21
PNKP-202ENST00000593706 HACE1Q8IYU2 909 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 STAMQ92783 540 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 RPS6KC1Q96S38 1066 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 GAD1Q99259 594 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 KCNK12Q9HB15 430 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 BRMS1Q9HCU9 246 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
PNKP-202ENST00000593706 DUSP12Q9UNI6 340 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 HES2Q9Y543 173 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 FANCMQ8IYD8 2048 aa16.39■□□□□ 0.21
PNKP-202ENST00000593706 CCDC195A0A1B0GUA6 201 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 PROB1E7EW31 1015 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 ZBTB39O15060 712 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 INPPL1O15357 1258 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 TEX28O15482 410 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 LILRB3O75022 631 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 MYBP10242 640 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 RFX1P22670 979 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 KRT2P35908 639 aa16.38■□□□□ 0.21
PNKP-202ENST00000593706 SPIRE1Q08AE8 756 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms