RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 TMC5Q6UXY8 1006 aa26.63■■□□□ 1.85
LSM4-202ENST00000593564 MRPL17Q9NRX2 175 aaKnown RBP26.63■■□□□ 1.85
LSM4-202ENST00000593564 ANKEF1Q9NU02 776 aa26.63■■□□□ 1.85
LSM4-202ENST00000593564 ARID2Q68CP9 1835 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 DGAT1O75907 488 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 BRD1O95696 1058 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 CNPP09543 421 aaKnown RBP26.62■■□□□ 1.85
LSM4-202ENST00000593564 CLCN4P51793 760 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 NCBP1Q09161 790 aaKnown RBP26.62■■□□□ 1.85
LSM4-202ENST00000593564 PLCD3Q8N3E9 789 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 PHOX2BQ99453 314 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 EIF2AQ9BY44 585 aaKnown RBP26.62■■□□□ 1.85
LSM4-202ENST00000593564 MARCH5Q9NX47 278 aa26.62■■□□□ 1.85
LSM4-202ENST00000593564 LARGE1O95461 756 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 PDGFBP01127 241 aaPredicted RBP26.61■■□□□ 1.85
LSM4-202ENST00000593564 SOD2P04179 222 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 SSBP05455 408 aaKnown RBP eCLIP26.61■■□□□ 1.85
LSM4-202ENST00000593564 KLRC2P26717 231 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 ARL2P36404 184 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 MBTD1Q05BQ5 628 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 CAPSQ13938 189 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 GPR149Q86SP6 731 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 COLGALT2Q8IYK4 626 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 NSUN7Q8NE18 718 aaKnown RBP26.61■■□□□ 1.85
LSM4-202ENST00000593564 ASAP3Q8TDY4 903 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 NFKBIZQ9BYH8 718 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 CSRNP2Q9H175 543 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 RNF39Q9H2S5 420 aa26.61■■□□□ 1.85
LSM4-202ENST00000593564 TTC12Q9H892 705 aaPredicted RBP26.61■■□□□ 1.85
LSM4-202ENST00000593564 ARL5CA6NH57 179 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 BTBD18B2RXH4 712 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 INO80B-WBP1J3KQ70 363 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 NEMFO60524 1076 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 DSC1Q08554 894 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 AMHR2Q16671 573 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 FEZF2Q8TBJ5 459 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 CPB2Q96IY4 423 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 GAD1Q99259 594 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 HERC2P3Q9BVR0 1158 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 LIMD1Q9UGP4 676 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 PRG3Q9Y2Y8 225 aaPredicted RBP26.6■■□□□ 1.85
LSM4-202ENST00000593564 MYO10Q9HD67 2058 aa26.6■■□□□ 1.85
LSM4-202ENST00000593564 URODP06132 367 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 ASGR2P07307 311 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 MLH1P40692 756 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 RARRES1P49788 294 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 NUBP1P53384 320 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 DIS3L2Q8IYB7 885 aaKnown RBP26.59■■□□□ 1.85
LSM4-202ENST00000593564 RNF168Q8IYW5 571 aaPredicted RBP26.59■■□□□ 1.85
LSM4-202ENST00000593564 MTMR9Q96QG7 549 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 SSX2IPQ9Y2D8 614 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 HES2Q9Y543 173 aa26.59■■□□□ 1.85
LSM4-202ENST00000593564 SPDYE4A6NLX3 237 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 WNT7AO00755 349 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 EFEMP2O95967 443 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 NEFLP07196 543 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 GLRA2P23416 452 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 TXKP42681 527 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 OR1G1P47890 313 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 C15orf39Q6ZRI6 1047 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 CCDC149Q6ZUS6 474 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 CCDC43Q96MW1 224 aaKnown RBP26.58■■□□□ 1.85
LSM4-202ENST00000593564 RPS6KC1Q96S38 1066 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 IRF2BPLQ9H1B7 796 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 SMOC2Q9H3U7 446 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 GIT1Q9Y2X7 761 aa26.58■■□□□ 1.85
LSM4-202ENST00000593564 ARF4P18085 180 aaPredicted RBP26.57■■□□□ 1.84
LSM4-202ENST00000593564 SCNN1GP51170 649 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 TRIM29Q14134 588 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 OTOP3Q7RTS5 596 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 HACE1Q8IYU2 909 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 ACSF2Q96CM8 615 aaPredicted RBP26.57■■□□□ 1.84
LSM4-202ENST00000593564 ZFP42Q96MM3 310 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 TRIM6Q9C030 488 aaPredicted RBP26.57■■□□□ 1.84
LSM4-202ENST00000593564 DENND4AQ7Z401 1863 aa26.57■■□□□ 1.84
LSM4-202ENST00000593564 C2CD2LO14523 706 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 JAK2O60674 1132 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 ADH1AP07327 375 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 XRCC6P12956 609 aaKnown RBP eCLIP26.56■■□□□ 1.84
LSM4-202ENST00000593564 GLUD2P49448 558 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 TAS1R1Q7RTX1 841 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 CMASQ8NFW8 434 aaPredicted RBP26.56■■□□□ 1.84
LSM4-202ENST00000593564 PIGOQ8TEQ8 1089 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 NXF3Q9H4D5 531 aaKnown RBP26.56■■□□□ 1.84
LSM4-202ENST00000593564 MIOSQ9NXC5 875 aa26.56■■□□□ 1.84
LSM4-202ENST00000593564 TEX28O15482 410 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 NR1I2O75469 434 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 KIAA0319Q5VV43 1072 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 APOL6Q9BWW8 343 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 POLR3FQ9H1D9 316 aaPredicted RBP26.55■■□□□ 1.84
LSM4-202ENST00000593564 RXFP1Q9HBX9 757 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 MAN1C1Q9NR34 630 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 DPP7Q9UHL4 492 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 ZMYM2Q9UBW7 1377 aa26.55■■□□□ 1.84
LSM4-202ENST00000593564 POTEMA6NI47 508 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 B4GALT5O43286 388 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 FOSBP53539 338 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 DSG1Q02413 1049 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 SLC27A1Q6PCB7 646 aa26.54■■□□□ 1.84
LSM4-202ENST00000593564 ELMSAN1Q6PJG2 1045 aa26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms