RNA–Protein interactions for RNA: ENST00000592619.5

VMP1-215, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-215ENST00000592619 C7orf25Q9BPX7 421 aa7.89□□□□□ -1.15
VMP1-215ENST00000592619 NAA15Q9BXJ9 866 aaKnown RBP7.89□□□□□ -1.15
VMP1-215ENST00000592619 B3GNT5Q9BYG0 378 aa7.89□□□□□ -1.15
VMP1-215ENST00000592619 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.89□□□□□ -1.15
VMP1-215ENST00000592619 H0Y858 1186 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 IFRD1O00458 451 aaPredicted RBP7.88□□□□□ -1.15
VMP1-215ENST00000592619 PHF2O75151 1096 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 PAPLNO95428 1278 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 COL6A1P12109 1028 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 ITGB5P18084 799 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 FOXO4P98177 505 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 SAFB2Q14151 953 aaKnown RBP eCLIP7.88□□□□□ -1.15
VMP1-215ENST00000592619 EIF4HQ15056 248 aaKnown RBP7.88□□□□□ -1.15
VMP1-215ENST00000592619 NOMO1Q15155 1222 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 KIAA0753Q2KHM9 967 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 C19orf54Q5BKX5 351 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 MPZL3Q6UWV2 235 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 TOGARAM2Q6ZUX3 1019 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 OTOP2Q7RTS6 562 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 MORC1Q86VD1 984 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 IGDCC3Q8IVU1 814 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 UNC5BQ8IZJ1 945 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 NSUN6Q8TEA1 469 aaKnown RBP7.88□□□□□ -1.15
VMP1-215ENST00000592619 HOXB13Q92826 284 aaPredicted RBP7.88□□□□□ -1.15
VMP1-215ENST00000592619 GJA10Q969M2 543 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 PTPN18Q99952 460 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 STXBP5LQ9Y2K9 1186 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 PCDHB1Q9Y5F3 818 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 CUX1P39880 1505 aa7.88□□□□□ -1.15
VMP1-215ENST00000592619 IFT140Q96RY7 1462 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 CAPN8A6NHC0 703 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 GOLIM4O00461 696 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 N4BP3O15049 544 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 LTA4HP09960 611 aaKnown RBP7.87□□□□□ -1.15
VMP1-215ENST00000592619 AK2P54819 239 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 IRX6P78412 446 aaPredicted RBP7.87□□□□□ -1.15
VMP1-215ENST00000592619 SEPT2Q15019 361 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 LCE1DQ5T752 114 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 TSHZ1Q6ZSZ6 1077 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 STK32CQ86UX6 486 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 KAT5Q92993 513 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 IL17RAQ96F46 866 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 LIN37Q96GY3 246 aaPredicted RBP7.87□□□□□ -1.15
VMP1-215ENST00000592619 CDK5RAP3Q96JB5 506 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 ZSWIM3Q96MP5 696 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 ARPC5LQ9BPX5 153 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 MCOLN1Q9GZU1 580 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 BHMT2Q9H2M3 363 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 TAGLN3Q9UI15 199 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 DNAI1Q9UI46 699 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 MAGEL2Q9UJ55 1249 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 PCDHA13Q9Y5I0 950 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 BIVM-ERCC5R4GMW8 1640 aa7.87□□□□□ -1.15
VMP1-215ENST00000592619 TOP2BQ02880 1626 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 A0A088AWK7 358 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 SEMA7AO75326 666 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 ENDOD1O94919 500 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 ADCY8P40145 1251 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 MAP2K6P52564 334 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 SESN2P58004 480 aaPredicted RBP7.86□□□□□ -1.15
VMP1-215ENST00000592619 GPSM2P81274 684 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 RNF220Q5VTB9 566 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 TAS1R1Q7RTX1 841 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 DAAM2Q86T65 1068 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 FAM129CQ86XR2 697 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 DRC7Q8IY82 874 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 KRT78Q8N1N4 520 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 KLHDC4Q8TBB5 520 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 SNX33Q8WV41 574 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 FAM168AQ92567 244 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 RGMAQ96B86 450 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 TNIP3Q96KP6 325 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 NOX5Q96PH1 765 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 EPB41L4BQ9H329 900 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 FAM53CQ9NYF3 392 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 CROTQ9UKG9 612 aa7.86□□□□□ -1.15
VMP1-215ENST00000592619 POLA1P09884 1462 aaPredicted RBP7.86□□□□□ -1.15
VMP1-215ENST00000592619 WDR97A6NE52 1622 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 TARBP1Q13395 1621 aaKnown RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 AKR1B10O60218 316 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 FTLP02792 175 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 GAAP10253 952 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 JUNBP17275 347 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 POLD1P28340 1107 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 ALDH5A1P51649 535 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 HK3P52790 923 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 TOP3AQ13472 1001 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 PRR31Q5SQ13 230 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 TRIM68Q6AZZ1 485 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 ABHD15Q6UXT9 468 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 MAEAQ7L5Y9 396 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 EPB41L4AQ9HCS5 686 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 DCP1AQ9NPI6 582 aaPredicted RBP7.85□□□□□ -1.15
VMP1-215ENST00000592619 NLRC4Q9NPP4 1024 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 POLHQ9Y253 713 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 NR2E3Q9Y5X4 410 aa7.85□□□□□ -1.15
VMP1-215ENST00000592619 WRNQ14191 1432 aaPredicted RBP eCLIP7.85□□□□□ -1.15
VMP1-215ENST00000592619 FGD5Q6ZNL6 1462 aa7.84□□□□□ -1.15
VMP1-215ENST00000592619 TM4SF4P48230 202 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms