RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CNTN2Q02246 1040 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 MAP2K1Q02750 393 aaPredicted RBP17.04■□□□□ 0.32
MBD1-227ENST00000592060 ENPEPQ07075 957 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 CYP24A1Q07973 514 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 FSTL1Q12841 308 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 STXBP2Q15833 593 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 XKR3Q5GH77 459 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 RASGEF1CQ8N431 466 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 SLC35G2Q8TBE7 412 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 ZNF526Q8TF50 670 aaPredicted RBP17.04■□□□□ 0.32
MBD1-227ENST00000592060 CTNNBL1Q8WYA6 563 aaPredicted RBP17.04■□□□□ 0.32
MBD1-227ENST00000592060 GDAP1L1Q96MZ0 367 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 POLR3FQ9H1D9 316 aaPredicted RBP17.04■□□□□ 0.32
MBD1-227ENST00000592060 SYNGAP1Q96PV0 1343 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 ANKRD62A6NC57 917 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 BUB1BO60566 1050 aaPredicted RBP17.04■□□□□ 0.32
MBD1-227ENST00000592060 GLI1P08151 1106 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 ATP4AP20648 1035 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 GPC3P51654 580 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 EPHB4P54760 987 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 PTPROQ16827 1216 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 KRT39Q6A163 491 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 DLK2Q6UY11 383 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 DAAM2Q86T65 1068 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 FAM71AQ8IYT1 594 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 SCFD2Q8WU76 684 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 KCNN1Q92952 543 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 KRT12Q99456 494 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 BTBD7Q9P203 1132 aa17.04■□□□□ 0.32
MBD1-227ENST00000592060 PEX10O60683 326 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 SYF2O95926 243 aaKnown RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 ABCB4P21439 1286 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 GARTP22102 1010 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 ALDH5A1P51649 535 aaPredicted RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 GYS2P54840 703 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 HADHBP55084 474 aaKnown RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 RIOX2Q8IUF8 465 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 CNKSR2Q8WXI2 1034 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 SHC3Q92529 594 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 CAVIN3Q969G5 261 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 CCDC102AQ96A19 550 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 THAP2Q9H0W7 228 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 ISCUQ9H1K1 167 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 TOPORSQ9NS56 1045 aaPredicted RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 NOCTQ9UK39 431 aaKnown RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 FAN1Q9Y2M0 1017 aa17.03■□□□□ 0.32
MBD1-227ENST00000592060 MAFBQ9Y5Q3 323 aaPredicted RBP17.03■□□□□ 0.32
MBD1-227ENST00000592060 CEP104O60308 925 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 HEXIM1O94992 359 aaKnown RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 CHRNB2P17787 502 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 GTF2H1P32780 548 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 RNASE9P60153 205 aaKnown RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 TNNC1P63316 161 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 EMC2Q15006 297 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 TCEAL1Q15170 157 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 MTERF2Q49AM1 385 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 BRDTQ58F21 947 aaPredicted RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 EMBQ6PCB8 327 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 SND1Q7KZF4 910 aaKnown RBP eCLIP17.02■□□□□ 0.32
MBD1-227ENST00000592060 CYFIP1Q7L576 1253 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 GPD1LQ8N335 351 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 HELQQ8TDG4 1101 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 EPS8L1Q8TE68 723 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 POMGNT1Q8WZA1 660 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 CCDC127Q96BQ5 260 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 ZBTB9Q96C00 473 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 CALR3Q96L12 384 aaKnown RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.02■□□□□ 0.328e-7■■□□□ 13.4
MBD1-227ENST00000592060 SEPT11Q9NVA2 429 aaKnown RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 VPS18Q9P253 973 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 ADAM21Q9UKJ8 722 aa17.02■□□□□ 0.32
MBD1-227ENST00000592060 NOC2LQ9Y3T9 749 aaKnown RBP17.02■□□□□ 0.32
MBD1-227ENST00000592060 IGKV6D-21A0A0A0MT36 114 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 A0A0U1RQG5 324 aaPredicted RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 H0YCG3 227 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 PGRMC1O00264 195 aaKnown RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 DDX3YO15523 660 aaKnown RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 SGPL1O95470 568 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 OATP04181 439 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 EDNRBP24530 442 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 HSP90B2PQ58FF3 399 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 NOP9Q86U38 636 aaKnown RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 IFT20Q8IY31 132 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 RPUSD2Q8IZ73 545 aaKnown RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 EXOC4Q96A65 974 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 IFT74Q96LB3 600 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 CEP89Q96ST8 783 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 POP1Q99575 1024 aaKnown RBP17.02■□□□□ 0.31
MBD1-227ENST00000592060 ZNF302Q9NR11 478 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 AMFRQ9UKV5 643 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 COG5Q9UP83 839 aa17.02■□□□□ 0.31
MBD1-227ENST00000592060 AGPSO00116 658 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 HNRNPDLO14979 420 aaKnown RBP17.01■□□□□ 0.31
MBD1-227ENST00000592060 RAD51CO43502 376 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 ABCD1P33897 745 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 NNTQ13423 1086 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 TAS1R2Q8TE23 839 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 PCDHB18PQ96TA0 734 aa17.01■□□□□ 0.31
MBD1-227ENST00000592060 PSD3Q9NYI0 1048 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms