RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 HPCAL4Q9UM19 191 aa21.33■■□□□ 1
MBD3-209ENST00000592012 SYNGAP1Q96PV0 1343 aa21.32■■□□□ 1
MBD3-209ENST00000592012 ABCB4P21439 1286 aa21.32■■□□□ 1
MBD3-209ENST00000592012 METTL13Q8N6R0 699 aa21.32■■□□□ 1
MBD3-209ENST00000592012 ANKRD62A6NC57 917 aa21.32■■□□□ 1
MBD3-209ENST00000592012 MTERF2Q49AM1 385 aa21.32■■□□□ 1
MBD3-209ENST00000592012 RIOX2Q8IUF8 465 aa21.32■■□□□ 1
MBD3-209ENST00000592012 ACTRT1Q8TDG2 376 aa21.32■■□□□ 1
MBD3-209ENST00000592012 TMC2Q8TDI7 906 aa21.32■■□□□ 1
MBD3-209ENST00000592012 IFT74Q96LB3 600 aa21.32■■□□□ 1
MBD3-209ENST00000592012 KREMEN1Q96MU8 473 aa21.32■■□□□ 1
MBD3-209ENST00000592012 POLR3FQ9H1D9 316 aaPredicted RBP21.32■■□□□ 1
MBD3-209ENST00000592012 ACBD3Q9H3P7 528 aa21.32■■□□□ 1
MBD3-209ENST00000592012 TMEM8AQ9HCN3 771 aa21.32■■□□□ 1
MBD3-209ENST00000592012 SEPT11Q9NVA2 429 aaKnown RBP21.32■■□□□ 1
MBD3-209ENST00000592012 ZC3H4Q9UPT8 1303 aaKnown RBP21.31■■□□□ 1
MBD3-209ENST00000592012 HNRNPDLO14979 420 aaKnown RBP21.31■■□□□ 1
MBD3-209ENST00000592012 ALDH5A1P51649 535 aaPredicted RBP21.31■■□□□ 1
MBD3-209ENST00000592012 PPATQ06203 517 aa21.31■■□□□ 1
MBD3-209ENST00000592012 SEPT14Q6ZU15 432 aa21.31■■□□□ 1
MBD3-209ENST00000592012 ZNF771Q7L3S4 317 aaPredicted RBP21.31■■□□□ 1
MBD3-209ENST00000592012 FAM71AQ8IYT1 594 aa21.31■■□□□ 1
MBD3-209ENST00000592012 HES6Q96HZ4 224 aa21.31■■□□□ 1
MBD3-209ENST00000592012 THAP2Q9H0W7 228 aa21.31■■□□□ 1
MBD3-209ENST00000592012 ADARB2Q9NS39 739 aaKnown RBP21.31■■□□□ 1
MBD3-209ENST00000592012 CSADQ9Y600 493 aa21.31■■□□□ 1
MBD3-209ENST00000592012 BUB1BO60566 1050 aaPredicted RBP21.31■■□□□ 1
MBD3-209ENST00000592012 GLI1P08151 1106 aa21.31■■□□□ 1
MBD3-209ENST00000592012 GARTP22102 1010 aa21.31■■□□□ 1
MBD3-209ENST00000592012 TNFRSF8P28908 595 aa21.31■■□□□ 1
MBD3-209ENST00000592012 AARSP49588 968 aaKnown RBP eCLIP21.31■■□□□ 1
MBD3-209ENST00000592012 GPC3P51654 580 aa21.31■■□□□ 1
MBD3-209ENST00000592012 CYP24A1Q07973 514 aa21.31■■□□□ 1
MBD3-209ENST00000592012 ARHGEF26Q96DR7 871 aa21.31■■□□□ 1
MBD3-209ENST00000592012 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.31■■□□□ 19e-7■■■■■ 133
MBD3-209ENST00000592012 ZNF302Q9NR11 478 aa21.31■■□□□ 1
MBD3-209ENST00000592012 FBXO40Q9UH90 709 aa21.31■■□□□ 1
MBD3-209ENST00000592012 ADM5C9JUS6 153 aa21.3■■□□□ 1
MBD3-209ENST00000592012 PPM1KQ8N3J5 372 aa21.3■■□□□ 1
MBD3-209ENST00000592012 CCDC102AQ96A19 550 aa21.3■■□□□ 1
MBD3-209ENST00000592012 KRT12Q99456 494 aa21.3■■□□□ 1
MBD3-209ENST00000592012 CEP104O60308 925 aa21.3■■□□□ 1
MBD3-209ENST00000592012 GTF2H1P32780 548 aa21.3■■□□□ 1
MBD3-209ENST00000592012 GYS2P54840 703 aa21.3■■□□□ 1
MBD3-209ENST00000592012 EMC2Q15006 297 aa21.3■■□□□ 1
MBD3-209ENST00000592012 GPD1LQ8N335 351 aa21.3■■□□□ 1
MBD3-209ENST00000592012 SCFD2Q8WU76 684 aa21.3■■□□□ 1
MBD3-209ENST00000592012 DCPSQ96C86 337 aaKnown RBP21.3■■□□□ 1
MBD3-209ENST00000592012 ZMYND15Q9H091 742 aa21.3■■□□□ 1
MBD3-209ENST00000592012 ISCUQ9H1K1 167 aa21.3■■□□□ 1
MBD3-209ENST00000592012 MED4Q9NPJ6 270 aa21.3■■□□□ 1
MBD3-209ENST00000592012 GDF3Q9NR23 364 aa21.3■■□□□ 1
MBD3-209ENST00000592012 TOPORSQ9NS56 1045 aaPredicted RBP21.3■■□□□ 1
MBD3-209ENST00000592012 IGKV6D-21A0A0A0MT36 114 aa21.29■■□□□ 1
MBD3-209ENST00000592012 A0A0U1RQG5 324 aaPredicted RBP21.29■■□□□ 1
MBD3-209ENST00000592012 TULP1O00294 542 aaPredicted RBP21.29■■□□□ 1
MBD3-209ENST00000592012 IRF6O14896 467 aa21.29■■□□□ 1
MBD3-209ENST00000592012 OATP04181 439 aa21.29■■□□□ 1
MBD3-209ENST00000592012 USP8P40818 1118 aa21.29■■□□□ 1
MBD3-209ENST00000592012 POLGP54098 1239 aaPredicted RBP21.29■■□□□ 1
MBD3-209ENST00000592012 PRPF4BQ13523 1007 aaKnown RBP21.29■■□□□ 1
MBD3-209ENST00000592012 SULF1Q8IWU6 871 aa21.29■■□□□ 1
MBD3-209ENST00000592012 HELQQ8TDG4 1101 aa21.29■■□□□ 1
MBD3-209ENST00000592012 TAS1R2Q8TE23 839 aa21.29■■□□□ 1
MBD3-209ENST00000592012 SHC3Q92529 594 aa21.29■■□□□ 1
MBD3-209ENST00000592012 SPATC1LQ9H0A9 340 aa21.29■■□□□ 1
MBD3-209ENST00000592012 DHX33Q9H6R0 707 aaKnown RBP21.29■■□□□ 1
MBD3-209ENST00000592012 KCNG1Q9UIX4 513 aa21.29■■□□□ 1
MBD3-209ENST00000592012 ADAM21Q9UKJ8 722 aa21.29■■□□□ 1
MBD3-209ENST00000592012 H0YCG3 227 aa21.29■■□□□ 1
MBD3-209ENST00000592012 SGPL1O95470 568 aa21.29■■□□□ 1
MBD3-209ENST00000592012 EDNRBP24530 442 aa21.29■■□□□ 1
MBD3-209ENST00000592012 MFAP3P55082 362 aa21.29■■□□□ 1
MBD3-209ENST00000592012 HSP90B2PQ58FF3 399 aa21.29■■□□□ 1
MBD3-209ENST00000592012 SV2AQ7L0J3 742 aa21.29■■□□□ 1
MBD3-209ENST00000592012 USP37Q86T82 979 aa21.29■■□□□ 1
MBD3-209ENST00000592012 RPUSD2Q8IZ73 545 aaKnown RBP21.29■■□□□ 1
MBD3-209ENST00000592012 FBXL13Q8NEE6 735 aa21.29■■□□□ 1
MBD3-209ENST00000592012 RAB20Q9NX57 234 aa21.29■■□□□ 1
MBD3-209ENST00000592012 NOCTQ9UK39 431 aaKnown RBP21.29■■□□□ 1
MBD3-209ENST00000592012 AMFRQ9UKV5 643 aa21.29■■□□□ 1
MBD3-209ENST00000592012 SYF2O95926 243 aaKnown RBP21.28■■□□□ 1
MBD3-209ENST00000592012 FTLP02792 175 aaPredicted RBP21.28■■□□□ 1
MBD3-209ENST00000592012 CHRNB2P17787 502 aa21.28■■□□□ 1
MBD3-209ENST00000592012 ABCD1P33897 745 aa21.28■■□□□ 1
MBD3-209ENST00000592012 ENPEPQ07075 957 aa21.28■■□□□ 1
MBD3-209ENST00000592012 IFT20Q8IY31 132 aa21.28■■□□□ 1
MBD3-209ENST00000592012 RASGEF1CQ8N431 466 aa21.28■■□□□ 1
MBD3-209ENST00000592012 FAM71BQ8TC56 605 aa21.28■■□□□ 1
MBD3-209ENST00000592012 EPS8L1Q8TE68 723 aa21.28■■□□□ 1
MBD3-209ENST00000592012 TMEM143Q96AN5 459 aa21.28■■□□□ 1
MBD3-209ENST00000592012 BICD1Q96G01 975 aa21.28■■□□□ 1
MBD3-209ENST00000592012 CEP89Q96ST8 783 aa21.28■■□□□ 1
MBD3-209ENST00000592012 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.28■■□□□ 19e-6■■■■■ 27.7
MBD3-209ENST00000592012 PORCNQ9H237 461 aa21.28■■□□□ 1
MBD3-209ENST00000592012 COG5Q9UP83 839 aa21.28■■□□□ 1
MBD3-209ENST00000592012 PAPPA2Q9BXP8 1791 aa21.28■■□□□ 1
MBD3-209ENST00000592012 A0A0G2JMZ2 1700 aa21.28■■□□□ 1
MBD3-209ENST00000592012 OTOFQ9HC10 1997 aa21.28■■□□□ 1
MBD3-209ENST00000592012 FAM170AA1A519 330 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms