RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 BTNL10A8MVZ5 291 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 KCNJ18B7U540 433 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 BTBD19C9JJ37 291 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 PSMA7O14818 248 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 AGTP01019 485 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 POLR3DP05423 398 aaPredicted RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 CLTAP09496 248 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 NUDT17P0C025 328 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 FDPSP14324 419 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 DRD4P21917 467 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 CALB2P22676 271 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 CTNNA1P35221 906 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 CCT6AP40227 531 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 TRAPPC10P48553 1259 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ACADVLP49748 655 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 SERPINB8P50452 374 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 RPL26P61254 145 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 HTRA3P83110 453 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 UBXN1Q04323 297 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 RNASELQ05823 741 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 FMR1Q06787 632 aaKnown RBP eCLIP6.4□□□□□ -1.38
NPC1-213ENST00000591955 NEXNQ0ZGT2 675 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 AIMP1Q12904 312 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 PABPC4Q13310 644 aaKnown RBP eCLIP6.4□□□□□ -1.38
NPC1-213ENST00000591955 KCNJ12Q14500 433 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 DDB1Q16531 1140 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ZNF648Q5T619 568 aaPredicted RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 SLC9C2Q5TAH2 1124 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 CCDC174Q6PII3 467 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 KSR2Q6VAB6 950 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 CEP128Q6ZU80 1094 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 CCDC80Q76M96 950 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ZNF589Q86UQ0 364 aaPredicted RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 RAB11FIP4Q86YS3 637 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 TMTC2Q8N394 836 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 MB21D1Q8N884 522 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ENDOVQ8N8Q3 282 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 PPFIBP2Q8ND30 876 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 PIK3R5Q8WYR1 880 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 RSPH1Q8WYR4 309 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 TAF4BQ92750 862 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 SYN2Q92777 582 aaPredicted RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 INPP5DQ92835 1189 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 GLMNQ92990 594 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ZNF653Q96CK0 615 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 KLHL29Q96CT2 875 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 THOC1Q96FV9 657 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 FGD4Q96M96 766 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 ZNF570Q96NI8 536 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 RUNDC3BQ96NL0 473 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 NR1H4Q96RI1 486 aaPredicted RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 SEC62Q99442 399 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 CENPKQ9BS16 269 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 TMEM109Q9BVC6 243 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 IFIH1Q9BYX4 1025 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 CUEDC2Q9H467 287 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 NRDE2Q9H7Z3 1164 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 RNPEPL1Q9HAU8 725 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 SAMSN1Q9NSI8 373 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.4□□□□□ -1.38
NPC1-213ENST00000591955 PARP2Q9UGN5 583 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 BLOC1S6Q9UL45 172 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 PAIP2BQ9ULR5 123 aaKnown RBP6.4□□□□□ -1.38
NPC1-213ENST00000591955 PLAAQ9Y263 795 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 NUB1Q9Y5A7 615 aa6.4□□□□□ -1.38
NPC1-213ENST00000591955 TNS2Q63HR2 1409 aa6.4□□□□□ -1.39
NPC1-213ENST00000591955 KLF18A0A0U1RQI7 1052 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 CCDC162PA2VCL2 907 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 A6NJR5 290 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 GRM8O00222 908 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 FOXP2O15409 715 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 POLR2DO15514 142 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 CYP26A1O43174 497 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TEX33O43247 280 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 CTNND1O60716 968 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 DIAPH2O60879 1101 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TIAF1O95411 115 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 KRT14P02533 472 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 SSBP05455 408 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPC1-213ENST00000591955 LINGO3P0C6S8 592 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 SRGNP10124 158 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 TRIM21P19474 475 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 BMP6P22004 513 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 MSH2P43246 934 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 NT5C2P49902 561 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 METAP2P50579 478 aaKnown RBP eCLIP6.39□□□□□ -1.39
NPC1-213ENST00000591955 CABP4P57796 275 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 CCT2P78371 535 aaKnown RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 PDE4BQ07343 736 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 C2orf54Q08AI8 447 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 ACVR2BQ13705 512 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 SPIDRQ14159 915 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 CCDC92Q53HC0 331 aaPredicted RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 ZNF658Q5TYW1 1059 aaPredicted RBP6.39□□□□□ -1.39
NPC1-213ENST00000591955 KRT40Q6A162 431 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 KLC3Q6P597 504 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 NME8Q8N427 588 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 AGAP11Q8TF27 550 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 C17orf50Q8WW18 174 aa6.39□□□□□ -1.39
NPC1-213ENST00000591955 RAPGEF5Q92565 580 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms