RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 MYCT1Q8N699 235 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 MRPS27Q92552 414 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 ACO2Q99798 780 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 C7orf25Q9BPX7 421 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 FGFBP2Q9BYJ0 223 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 TMEM117Q9H0C3 514 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 NXF3Q9H4D5 531 aaKnown RBP17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 RNF216Q9NWF9 866 aaPredicted RBP17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 LRFN2Q9ULH4 789 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 IPPQ9Y573 584 aa17.62■□□□□ 0.41
PRKCSH-213ENST00000591510 ATG2AQ2TAZ0 1938 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 N4BP3O15049 544 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 LPXNO60711 386 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 KRT18P05783 430 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 SKIP12755 728 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 GAP43P17677 238 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 NMT1P30419 496 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 GTF2BQ00403 316 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 LONRF3Q496Y0 759 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 LRRC55Q6ZSA7 311 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 HAUS6Q7Z4H7 955 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 GRAMD1CQ8IYS0 662 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 FSIP1Q8NA03 581 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 TMEM87AQ8NBN3 555 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 IPO9Q96P70 1041 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 TGS1Q96RS0 853 aaKnown RBP17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 C17orf80Q9BSJ5 609 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 CWH43Q9H720 699 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 OLFML3Q9NRN5 406 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 SEL1LQ9UBV2 794 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 SERTAD1Q9UHV2 236 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 TNFSF13BQ9Y275 285 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 ZMYM2Q9UBW7 1377 aa17.61■□□□□ 0.41
PRKCSH-213ENST00000591510 TBKBP1A7MCY6 615 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 HOXA2O43364 376 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 TRAK2O60296 914 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 B4GALT3O60512 393 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 NPTXRO95502 500 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 PIGRP01833 764 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 SCP2P22307 547 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 CASP1P29466 404 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 SMTNP53814 917 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 BTG3Q14201 252 aaPredicted RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 PAN2Q504Q3 1202 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 ZNF720Q7Z2F6 126 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 MAP4K3Q8IVH8 894 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 FIBCD1Q8N539 461 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 ENGASEQ8NFI3 743 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 HELQQ8TDG4 1101 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 FAM161BQ96MY7 647 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 PYM1Q9BRP8 204 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 TARS2Q9BW92 718 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 MRPL4Q9BYD3 311 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 USP25Q9UHP3 1055 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 KCNG1Q9UIX4 513 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 HES2Q9Y543 173 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 MYO7AQ13402 2215 aa17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 PRRC2BQ5JSZ5 2229 aaKnown RBP17.6■□□□□ 0.41
PRKCSH-213ENST00000591510 C5orf67F2Z3F1 127 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 H0YCG3 227 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 K7ENM7 598 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 OFD1O75665 1012 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 LIG1P18858 919 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 AFF1P51825 1210 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CASP5P51878 434 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 COASYQ13057 564 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 SNW1Q13573 536 aaKnown RBP17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 ADGRE1Q14246 886 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 SLC39A4Q6P5W5 647 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 ZPBP2Q6X784 338 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CLEC17AQ6ZS10 378 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 FAM178BQ8IXR5 827 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 FMR1NBQ8N0W7 255 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 RNF169Q8NCN4 708 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CNNM3Q8NE01 707 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 GSTCDQ8NEC7 633 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 PAGE5Q96GU1 130 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CDX2Q99626 313 aaPredicted RBP17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 HAPLN2Q9GZV7 340 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CDT1Q9H211 546 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 PRDM12Q9H4Q4 367 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 CERS4Q9HA82 394 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 TBX20Q9UMR3 447 aa17.59■□□□□ 0.41
PRKCSH-213ENST00000591510 PRUNE2Q8WUY3 3088 aa17.58■□□□□ 0.41
PRKCSH-213ENST00000591510 MEFVO15553 781 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 KLRC4O43908 158 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 SYKP43405 635 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 NCBP1Q09161 790 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 CUL4BQ13620 913 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 ZC2HC1CQ53FD0 456 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 TMEM192Q8IY95 271 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 RSPH1Q8WYR4 309 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 ZBTB45Q96K62 511 aaPredicted RBP17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 SAMD11Q96NU1 681 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 TYW1Q9NV66 732 aaKnown RBP17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 PANK4Q9NVE7 773 aa17.58■□□□□ 0.4
PRKCSH-213ENST00000591510 TRIP11Q15643 1979 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms