RNA–Protein interactions for RNA: ENST00000590654.1

GALNT1-204, Transcript of polypeptide N-acetylgalactosaminyltransferase 1, humanhuman

TSL 5

Gene GALNT1, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GALNT1-204ENST00000590654 KIAA1586Q9HCI6 787 aa9.63□□□□□ -0.87
GALNT1-204ENST00000590654 GIT1Q9Y2X7 761 aa9.63□□□□□ -0.87
GALNT1-204ENST00000590654 PCDHB2Q9Y5E7 798 aa9.63□□□□□ -0.87
GALNT1-204ENST00000590654 TCHHQ07283 1943 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 TANC1Q9C0D5 1861 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 HNRNPDLO14979 420 aaKnown RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 AFMP43652 599 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 HTRA4P83105 476 aaPredicted RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 STIM1Q13586 685 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 C9orf50Q5SZB4 431 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 MPZL3Q6UWV2 235 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 MAP4K3Q8IVH8 894 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 CMTR2Q8IYT2 770 aaKnown RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 URGCPQ8TCY9 931 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 SMARCE1Q969G3 411 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 VWCEQ96DN2 955 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 PPP1R16BQ96T49 567 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 ACO2Q99798 780 aaKnown RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 CCDC94Q9BW85 323 aaPredicted RBP9.62□□□□□ -0.87
GALNT1-204ENST00000590654 PLVAPQ9BX97 442 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 TMEM117Q9H0C3 514 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 MINDY3Q9H8M7 445 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 PLEKHA5Q9HAU0 1116 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 LTBP2Q14767 1821 aa9.62□□□□□ -0.87
GALNT1-204ENST00000590654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 DGKIO75912 1065 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 RHOBTB3O94955 611 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 GCNT3O95395 438 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 RPN1P04843 607 aaKnown RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 RB1P06400 928 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 ITGA4P13612 1032 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 PAX3P23760 479 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 BMS1Q14692 1282 aaKnown RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 AMHR2Q16671 573 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 L1TD1Q5T7N2 865 aaKnown RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 RTN4RL1Q86UN2 441 aaPredicted RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 SFR1Q86XK3 245 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 CD302Q8IX05 232 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 TMEM174Q8WUU8 243 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 BSNDQ8WZ55 320 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 TBC1D7Q9P0N9 293 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 CXXC1Q9P0U4 656 aaPredicted RBP9.61□□□□□ -0.87
GALNT1-204ENST00000590654 TTC3P53804 2025 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 ARID2Q68CP9 1835 aa9.61□□□□□ -0.87
GALNT1-204ENST00000590654 NPHP3-ACAD11A0A0J9YXS1 232 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 CLTAP09496 248 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 PRKCSHP14314 528 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 GARTP22102 1010 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 MATR3P43243 847 aaKnown RBP eCLIP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 MCL1Q07820 350 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 COASYQ13057 564 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 MYBPC2Q14324 1141 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 ZNF568Q3ZCX4 644 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 HABP4Q5JVS0 413 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 USP37Q86T82 979 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 CRIPAKQ8N1N5 446 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 FIBCD1Q8N539 461 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 TRIML1Q8N9V2 468 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 ZNF507Q8TCN5 953 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SYAP1Q96A49 352 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 ZNF668Q96K58 619 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 ACAP3Q96P50 834 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 STRA6Q9BX79 667 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 GBP3Q9H0R5 595 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SLC38A7Q9NVC3 462 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 STYXL1Q9Y6J8 313 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 TET1Q8NFU7 2136 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 TRIOBPQ9H2D6 2365 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 INPPL1O15357 1258 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 XPOTO43592 962 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 CSDE1O75534 798 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 PPP1R37O75864 691 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 UPP2O95045 317 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 LIG1P18858 919 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 PROZP22891 400 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 PPM1AP35813 382 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 ALDH7A1P49419 539 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 EHHADHQ08426 723 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 DPYDQ12882 1025 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 CUL4BQ13620 913 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 BTG3Q14201 252 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 NOLC1Q14978 699 aaKnown RBP eCLIP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SURF1Q15526 300 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 KNOP1Q1ED39 458 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SKOR2Q2VWA4 1001 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 COBLL1Q53SF7 1204 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 CT47A1Q5JQC4 288 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.6□□□□□ -0.872e-6■■■■□ 21.6
GALNT1-204ENST00000590654 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 LRRC43Q8N309 656 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SPATA20Q8TB22 786 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 TIFAQ96CG3 184 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 FAM193BQ96PV7 902 aaPredicted RBP9.6□□□□□ -0.87
GALNT1-204ENST00000590654 RPS6KC1Q96S38 1066 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 RSAD1Q9HA92 442 aa9.6□□□□□ -0.87
GALNT1-204ENST00000590654 PTPRHQ9HD43 1115 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms