RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 OTUD7AQ8TE49 926 aaPredicted RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 HNRNPLLQ8WVV9 542 aaKnown RBP7.34□□□□□ -1.23
DNMT1-222ENST00000590619 PIBF1Q8WXW3 757 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 CUL5Q93034 780 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 MCRS1Q96EZ8 462 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 B3GALT6Q96L58 329 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 VPS45Q9NRW7 570 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 AKT3Q9Y243 479 aa7.34□□□□□ -1.23
DNMT1-222ENST00000590619 EVPLQ92817 2033 aa7.34□□□□□ -1.24
DNMT1-222ENST00000590619 BAZ2BQ9UIF8 2168 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 NFASCO94856 1347 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 TTC41PQ6P2S7 1318 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 NRG2O14511 850 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 CDX4O14627 284 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 BACH1O14867 736 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 MAGEB2O15479 319 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 POMCP01189 267 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 PRB1P04280 392 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 SKIP12755 728 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 RPL17P18621 184 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 GPC3P51654 580 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 PTGDRQ13258 359 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 SEC23AQ15436 765 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 WDR44Q5JSH3 913 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 IFIT1BQ5T764 474 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 DAB2IPQ5VWQ8 1189 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 PDXDC2PQ6P474 469 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 AGMOQ6ZNB7 445 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 ZNF589Q86UQ0 364 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 MAP4K3Q8IVH8 894 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 CCDC60Q8IWA6 550 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 NPAS3Q8IXF0 933 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 COLGALT2Q8IYK4 626 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 LRRC71Q8N4P6 559 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 DNASE1L2Q92874 299 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 ZC3H10Q96K80 434 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 MBOAT7Q96N66 472 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 FAM193BQ96PV7 902 aaPredicted RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 MXRA8Q9BRK3 442 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 SDF4Q9BRK5 362 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 GPR62Q9BZJ7 368 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 DCTPP1Q9H773 170 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 AGO4Q9HCK5 861 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 ZNF302Q9NR11 478 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 RBM12Q9NTZ6 932 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 FAM105AQ9NUU6 356 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 HCFC1R1Q9NWW0 138 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 FNIP2Q9P278 1114 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 DNMT3BQ9UBC3 853 aaKnown RBP7.33□□□□□ -1.24
DNMT1-222ENST00000590619 PCDHGA5Q9Y5G8 931 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 IGSF10Q6WRI0 2623 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 MYH15Q9Y2K3 1946 aa7.33□□□□□ -1.24
DNMT1-222ENST00000590619 ZMYM6O95789 1325 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 A0A0D9SFI3 127 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 F8W810 466 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 CCL16O15467 120 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 HNRNPA1P09651 372 aaKnown RBP eCLIP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 CCNE1P24864 410 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 MPLP40238 635 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 OR1G1P47890 313 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 NT5C2P49902 561 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 GRM2Q14416 872 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 GRM4Q14833 912 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 FAM160B1Q5W0V3 765 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 TWF2Q6IBS0 349 aaKnown RBP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 MRPL10Q7Z7H8 261 aaKnown RBP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 ZNF710Q8N1W2 664 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 DEFB124Q8NES8 71 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 GAB3Q8WWW8 586 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 ING5Q8WYH8 240 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 ELSPBP1Q96BH3 223 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 LRIG1Q96JA1 1093 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 EDEM2Q9BV94 578 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 PSTPIP2Q9H939 334 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 ZNF334Q9HCZ1 680 aaPredicted RBP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 TRPV5Q9NQA5 729 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 MIOSQ9NXC5 875 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 KANSL3Q9P2N6 904 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 KCNH3Q9ULD8 1083 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 PCDHA6Q9UN73 950 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 POLIQ9UNA4 740 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 PRG3Q9Y2Y8 225 aaPredicted RBP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 PCDHA8Q9Y5H6 950 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 MAFBQ9Y5Q3 323 aaPredicted RBP7.32□□□□□ -1.24
DNMT1-222ENST00000590619 MYH6P13533 1939 aa7.32□□□□□ -1.24
DNMT1-222ENST00000590619 PCNX2A6NKB5 2137 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 DDX39AO00148 427 aaKnown RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 DHX15O43143 795 aaKnown RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 RPP40O75818 363 aaKnown RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 TMOD1P28289 359 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 PXNP49023 591 aaPredicted RBP7.31□□□□□ -1.24
DNMT1-222ENST00000590619 FGD1P98174 961 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 SCAPQ12770 1279 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 ITPR1Q14643 2758 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 UBE2SQ16763 222 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 PPM1LQ5SGD2 360 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 Q6ZS52 159 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 CKAP2LQ8IYA6 745 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 GPR65Q8IYL9 337 aa7.31□□□□□ -1.24
DNMT1-222ENST00000590619 CHCHD4Q8N4Q1 142 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms