RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 HERC6Q8IVU3 1022 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 GPT2Q8TD30 523 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 GSDMAQ96QA5 445 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 PDZD7Q9H5P4 517 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 ELAC1Q9H777 363 aaKnown RBP13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 PTPRHQ9HD43 1115 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 EXOC1Q9NV70 894 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 LRFN2Q9ULH4 789 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 TTC3P53804 2025 aa13.4□□□□□ -0.26
GPATCH1-202ENST00000590062 N4BP3O15049 544 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 TLL1O43897 1013 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 SMC2O95347 1197 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 GJB5O95377 273 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 GCNT3O95395 438 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 MYBP10242 640 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 SKIP12755 728 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 IBSPP21815 317 aaPredicted RBP13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 ZC2HC1CQ53FD0 456 aaPredicted RBP13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 ATF7IP2Q5U623 682 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 SLC27A1Q6PCB7 646 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 STXBP4Q6ZWJ1 553 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 NPAS4Q8IUM7 802 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 KIAA0895Q8NCT3 520 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 HPS3Q969F9 1004 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 TOP1MTQ969P6 601 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 CCDC47Q96A33 483 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 CPB2Q96IY4 423 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 CLSTN2Q9H4D0 955 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 FAM105AQ9NUU6 356 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 RMND1Q9NWS8 449 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 TBC1D7Q9P0N9 293 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 PCDHB13Q9Y5F0 798 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 PCDHA5Q9Y5H7 936 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 COL4A6Q14031 1691 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 PTPRSQ13332 1948 aa13.39□□□□□ -0.27
GPATCH1-202ENST00000590062 ZMYM2Q9UBW7 1377 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 TOM1L1O75674 476 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 UPP2O95045 317 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 ATF7P17544 494 aaPredicted RBP13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 STK4Q13043 487 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 DCAF4L1Q3SXM0 396 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 FAM109BQ6ICB4 259 aaPredicted RBP13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 FAM117BQ6P1L5 589 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 MRPL10Q7Z7H8 261 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 ECHDC2Q86YB7 292 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 GLIS3Q8NEA6 775 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 ZNF507Q8TCN5 953 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 SCFD1Q8WVM8 642 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 SMARCE1Q969G3 411 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 YME1L1Q96TA2 773 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 TARS2Q9BW92 718 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 GTPBP4Q9BZE4 634 aaKnown RBP13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 TMEM206Q9H813 350 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 TMEM161AQ9NX61 479 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 EXOC7Q9UPT5 735 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 PCDHB7Q9Y5E2 793 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 PCDHA11Q9Y5I1 949 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 STYXL1Q9Y6J8 313 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 GBF1Q92538 1859 aa13.38□□□□□ -0.27
GPATCH1-202ENST00000590062 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 GRXCR1A8MXD5 290 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 HOXA2O43364 376 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 EOMESO95936 686 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 PTMSP20962 102 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 DNAJB2P25686 324 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 HOXD13P35453 343 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 MCL1Q07820 350 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 KCNA1Q09470 495 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 COBLL1Q53SF7 1204 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 EEF1DP3Q658K8 133 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 SLC39A4Q6P5W5 647 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 MPZL3Q6UWV2 235 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 APBB1IPQ7Z5R6 666 aaPredicted RBP13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 HACE1Q8IYU2 909 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 RSPH1Q8WYR4 309 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 ACCSQ96QU6 501 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 RAD9AQ99638 391 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 ADPGKQ9BRR6 497 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 EIF2AQ9BY44 585 aaKnown RBP13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 PBX4Q9BYU1 374 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 TRIM6Q9C030 488 aaPredicted RBP13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 RC3H2Q9HBD1 1191 aaKnown RBP13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 SLC39A2Q9NP94 309 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 USP20Q9Y2K6 914 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 INSL6Q9Y581 213 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 PCDHB2Q9Y5E7 798 aa13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 RANBP2P49792 3224 aaKnown RBP13.37□□□□□ -0.27
GPATCH1-202ENST00000590062 TMEM265A0A087WTH1 108 aa13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 HNRNPDLO14979 420 aaKnown RBP13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 PRPF6O94906 941 aaKnown RBP13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 MCF2P10911 925 aa13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 LIG4P49917 911 aa13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 RABGGTBP53611 331 aa13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 HTRA4P83105 476 aaPredicted RBP13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 ZNF568Q3ZCX4 644 aa13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 RBM43Q6ZSC3 357 aaKnown RBP13.36□□□□□ -0.27
GPATCH1-202ENST00000590062 TMCO2Q7Z6W1 182 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms