RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 PDCD2LQ9BRP1 358 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 ZMYND15Q9H091 742 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 UNC93B1Q9H1C4 597 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 PRO3102Q9H379 93 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 PDE11AQ9HCR9 933 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 CWC15Q9P013 229 aaKnown RBP11.5□□□□□ -0.57
ZNF540-208ENST00000589857 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
ZNF540-208ENST00000589857 USP20Q9Y2K6 914 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 NCANO14594 1321 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 NFASCO94856 1347 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 ADGRA2Q96PE1 1338 aa11.5□□□□□ -0.57
ZNF540-208ENST00000589857 TRIOBPQ9H2D6 2365 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 DDX39AO00148 427 aaKnown RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 PDE2AO00408 941 aaPredicted RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 VWA5AO00534 786 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 ZNF185O15231 689 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 KIF4AO95239 1232 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 INHAP05111 366 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 PSAPP07602 524 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 MYCLP12524 364 aaPredicted RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 TNFAIP3P21580 790 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 CYP2C19P33261 490 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 FLT3LGP49771 235 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 NCKAP1LP55160 1127 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 RTP1P59025 263 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 MTMR2Q13614 643 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 DRAP1Q14919 205 aaPredicted RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 ZC2HC1CQ53FD0 456 aaPredicted RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 SMYD5Q6GMV2 418 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 DPY19L2P1Q6NXN4 242 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 NSMFQ6X4W1 530 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 PEX26Q7Z412 305 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 RHOT2Q8IXI1 618 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 ANKRD13CQ8N6S4 541 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 ACTRT1Q8TDG2 376 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 MORC4Q8TE76 937 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 RFFLQ8WZ73 363 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 CAVIN3Q969G5 261 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 DEFB118Q96PH6 123 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 MOV10L1Q9BXT6 1211 aaKnown RBP11.49□□□□□ -0.57
ZNF540-208ENST00000589857 NENFQ9UMX5 172 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 PCDHA10Q9Y5I2 948 aa11.49□□□□□ -0.57
ZNF540-208ENST00000589857 GOLGA6BA6NDN3 693 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 GOLGA8KD6RF30 607 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 PGRMC1O00264 195 aaKnown RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 HSF2BPO75031 334 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 CYP2C8P10632 490 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 EIF2AK2P19525 551 aaKnown RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 MFAP3P55082 362 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 MRPS9P82933 396 aaKnown RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 ITGB3BPQ13352 177 aaPredicted RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 ENOX2Q16206 610 aaKnown RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 XKR9Q5GH70 373 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 LEKR1Q6ZMV7 388 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 GADL1Q6ZQY3 521 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 ENOSF1Q7L5Y1 443 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 DAW1Q8N136 415 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 TMC2Q8TDI7 906 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 WHAMMQ8TF30 809 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 AENQ8WTP8 325 aaKnown RBP11.48□□□□□ -0.57
ZNF540-208ENST00000589857 IFT74Q96LB3 600 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 TAAR1Q96RJ0 339 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 ACAD9Q9H845 621 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 KIAA1586Q9HCI6 787 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 HOXC10Q9NYD6 342 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 HSPBP1Q9NZL4 362 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 COL20A1Q9P218 1284 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 AMFRQ9UKV5 643 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 HPCAL4Q9UM19 191 aa11.48□□□□□ -0.57
ZNF540-208ENST00000589857 BRCA2P51587 3418 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 CEP290O15078 2479 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 A0A0G2JLL6 359 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-208ENST00000589857 GOLGA6L10A0A0M3HER8 536 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 ANKRD62A6NC57 917 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 MIF4GDA9UHW6 222 aaKnown RBP11.47□□□□□ -0.57
ZNF540-208ENST00000589857 KCNK3O14649 394 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 NCK2O43639 380 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 DGAT1O75907 488 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 FTCDO95954 541 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 IVLP07476 585 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 CTGFP29279 349 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 DSG3P32926 999 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 GCLCP48506 637 aaPredicted RBP11.47□□□□□ -0.57
ZNF540-208ENST00000589857 MXI1P50539 228 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 HADHBP55084 474 aaKnown RBP11.47□□□□□ -0.57
ZNF540-208ENST00000589857 KCNA1Q09470 495 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 SPP2Q13103 211 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 PPFIA1Q13136 1202 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 CUL1Q13616 776 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 COG2Q14746 738 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 TCEAL1Q15170 157 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 MUM1L1Q5H9M0 696 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 FAM102BQ5T8I3 360 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 PPP1R2P3Q6NXS1 205 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 MIS18BP1Q6P0N0 1132 aa11.47□□□□□ -0.57
ZNF540-208ENST00000589857 PRRT2Q7Z6L0 340 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms