RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FEZ2Q9UHY8 353 aaPredicted RBP15.63■□□□□ 0.09
RETREG3-208ENST00000589797 ZRANB2O95218 330 aaKnown RBP eCLIP15.63■□□□□ 0.09
RETREG3-208ENST00000589797 ARHGAP25P42331 645 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 ARSHQ5FYA8 562 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 TAS1R2Q8TE23 839 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 ACSF2Q96CM8 615 aaPredicted RBP15.63■□□□□ 0.09
RETREG3-208ENST00000589797 MMP19Q99542 508 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 MED10Q9BTT4 135 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 STMN4Q9H169 189 aaPredicted RBP15.63■□□□□ 0.09
RETREG3-208ENST00000589797 C5P01031 1676 aa15.63■□□□□ 0.09
RETREG3-208ENST00000589797 NKRFO15226 690 aaKnown RBP eCLIP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SGPL1O95470 568 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SPATA31C1P0DKV0 1188 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SEMA3FQ13275 785 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 EMC2Q15006 297 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 PPP6R3Q5H9R7 873 aaPredicted RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CCNI2Q6ZMN8 369 aaPredicted RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 ZNF507Q8TCN5 953 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 KCNMB3Q9NPA1 279 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 ALG6Q9Y672 507 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SCN11AQ9UI33 1791 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 ADM5C9JUS6 153 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 RAD51CO43502 376 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CSPG5O95196 566 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 VIL1P09327 827 aaKnown RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 POLR2BP30876 1174 aaKnown RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CIITAP33076 1130 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 RRP1BQ14684 758 aaKnown RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 ZNF699Q32M78 642 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 Q4G0T1 1027 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 ZNF667Q5HYK9 610 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CCDC91Q7Z6B0 441 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 PNMA8AQ86V59 439 aaPredicted RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 TMEM139Q8IV31 216 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 HSPH1Q92598 858 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SLC35C1Q96A29 364 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.62■□□□□ 0.097e-6■■□□□ 11.5
RETREG3-208ENST00000589797 RNF19AQ9NV58 838 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SEPT10Q9P0V9 454 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 FBXO40Q9UH90 709 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 TLR3O15455 904 aaKnown RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 DLG4P78352 724 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 IFT88Q13099 833 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CBWD6Q4V339 395 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CCDC38Q502W7 563 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CBWD3Q5JTY5 395 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 CBWD5Q5RIA9 395 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 LRRC55Q6ZSA7 311 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SLC17A8Q8NDX2 589 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SPON1Q9HCB6 807 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 GOLGA8KD6RF30 607 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 P4HA1P13674 534 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 HADHQ16836 314 aaKnown RBP15.62■□□□□ 0.09
RETREG3-208ENST00000589797 SLFN12LQ6IEE8 588 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 RFX6Q8HWS3 928 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 OR6B3Q8NGW1 331 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 FERMT1Q9BQL6 677 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 TXNDC16Q9P2K2 825 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 TBX20Q9UMR3 447 aa15.62■□□□□ 0.09
RETREG3-208ENST00000589797 VWA5AO00534 786 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 CAPN9O14815 690 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 KCNMA1Q12791 1236 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 TRAPPC11Q7Z392 1133 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 PALM2Q8IXS6 379 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 A0A1W2PQJ5 194 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 H2AFXP16104 143 aaPredicted RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 EMBQ6PCB8 327 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 SLC16A10Q8TF71 515 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 TRAPPC12Q8WVT3 735 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 SPIRE2Q8WWL2 714 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 SEPT1Q8WYJ6 367 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 ZBTB45Q96K62 511 aaPredicted RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 PXMP2Q9NR77 195 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 ANAPC5Q9UJX4 755 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 RIPK3Q9Y572 518 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 NUB1Q9Y5A7 615 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 MAD1L1Q9Y6D9 718 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 PDE2AO00408 941 aaPredicted RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 ZSCAN20P17040 1043 aaPredicted RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 BASP1P80723 227 aaKnown RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 PGM5Q15124 567 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 FUT8Q9BYC5 575 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 SUCLA2Q9P2R7 463 aaPredicted RBP15.61■□□□□ 0.09
RETREG3-208ENST00000589797 FBXL5Q9UKA1 691 aa15.61■□□□□ 0.09
RETREG3-208ENST00000589797 SRCAPQ6ZRS2 3230 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 GRAP2O75791 330 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 NR1D1P20393 614 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 COMTP21964 271 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 STX2P32856 288 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 CLCN3P51790 818 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 FAM83AQ86UY5 434 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 AGO4Q9HCK5 861 aaKnown RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 ARFGEF2Q9Y6D5 1785 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 LRRIQ3A6PVS8 624 aaPredicted RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 C19orf81C9J6K1 198 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 HLA-DRAP01903 254 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 TCF7P36402 384 aaPredicted RBP15.6■□□□□ 0.09
RETREG3-208ENST00000589797 LY6KQ17RY6 165 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 TATDN2Q93075 761 aa15.6■□□□□ 0.09
RETREG3-208ENST00000589797 NSRP1Q9H0G5 558 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms