RNA–Protein interactions for RNA: ENST00000589742.5

RFX2-215, Transcript of regulatory factor X2, human

TSL 4

Gene RFX2, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-215	ENST00000589742	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	CLLU1OS	Q5K130	101 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	ATF7IP2	Q5U623	682 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	AGMO	Q6ZNB7	445 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	DEFB123	Q8N688	67 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	SP7	Q8TDD2	431 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	HELQ	Q8TDG4	1101 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	HPS3	Q969F9	1004 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	CCDC51	Q96ER9	411 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	ZBTB45	Q96K62	511 aa	Predicted RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	ACO2	Q99798	780 aa	Known RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	C7orf25	Q9BPX7	421 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	PYM1	Q9BRP8	204 aa	Known RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	LRRC27	Q9C0I9	530 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	RC3H2	Q9HBD1	1191 aa	Known RBP	13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	HCST	Q9UBK5	93 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	MTUS1	Q9ULD2	1270 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	IPP	Q9Y573	584 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	PHLPP2	Q6ZVD8	1323 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	CNTNAP2	Q9UHC6	1331 aa		13.11	□□□□□ -0.31
RFX2-215	ENST00000589742	RFXAP	O00287	272 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	N4BP3	O15049	544 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	ZNF202	O95125	648 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	ITGA4	P13612	1032 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	GAP43	P17677	238 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	RAB27A	P51159	221 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	COASY	Q13057	564 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	GPR153	Q6NV75	609 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	SLC27A1	Q6PCB7	646 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	ZNF720	Q7Z2F6	126 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	MRPL10	Q7Z7H8	261 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	ZBTB33	Q86T24	672 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	CCDC65	Q8IXS2	484 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	FIBCD1	Q8N539	461 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	CNNM3	Q8NE01	707 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	ARNTL2	Q8WYA1	636 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	CASD1	Q96PB1	797 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	C17orf80	Q9BSJ5	609 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	MRPL4	Q9BYD3	311 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	FGFBP2	Q9BYJ0	223 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	TRIM6	Q9C030	488 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	NXF3	Q9H4D5	531 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	MRPL44	Q9H9J2	332 aa	Known RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	MAGEF1	Q9HAY2	307 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	RNF216	Q9NWF9	866 aa	Predicted RBP	13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	USP25	Q9UHP3	1055 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	TBX20	Q9UMR3	447 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	INPP5F	Q9Y2H2	1132 aa		13.1	□□□□□ -0.31
RFX2-215	ENST00000589742	FRMD3	A2A2Y4	597 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	EPOP	A6NHQ4	379 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	OFD1	O75665	1012 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	PRR29	P0C7W0	189 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	MYB	P10242	640 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	HARS	P12081	509 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	AKAP5	P24588	427 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	AFF1	P51825	1210 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	CASP5	P51878	434 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	CSPP1	Q1MSJ5	1256 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	KRBA2	Q6ZNG9	492 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	LRRC55	Q6ZSA7	311 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	CMTR2	Q8IYT2	770 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	ABI1	Q8IZP0	508 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	PGBD4	Q96DM1	585 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	BICD1	Q96G01	975 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TGS1	Q96RS0	853 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	ADPGK	Q9BRR6	497 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TCHP	Q9BT92	498 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TMEM117	Q9H0C3	514 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	IKZF4	Q9H2S9	585 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	PRDM12	Q9H4Q4	367 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TYW1	Q9NV66	732 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	SNTG2	Q9NY99	539 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	KLK14	Q9P0G3	267 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	PARP2	Q9UGN5	583 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TNFSF13B	Q9Y275	285 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	MRPL42	Q9Y6G3	142 aa	Known RBP	13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	SZT2	Q5T011	3432 aa		13.09	□□□□□ -0.31
RFX2-215	ENST00000589742	TMEM265	A0A087WTH1	108 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742		H0YCG3	227 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	HOXA2	O43364	376 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	PRPF40A	O75400	957 aa	Known RBP	13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	PRPF6	O94906	941 aa	Known RBP	13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	GCNT3	O95395	438 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	ERVK-21	P61565	698 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	GTF2B	Q00403	316 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	KCNA1	Q09470	495 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	SNW1	Q13573	536 aa	Known RBP	13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	ZNF568	Q3ZCX4	644 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	SPOUT1	Q5T280	376 aa	Known RBP	13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	CNNM4	Q6P4Q7	775 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	UNC13D	Q70J99	1090 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	TMEM192	Q8IY95	271 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	FMR1NB	Q8N0W7	255 aa	Predicted RBP	13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	CEP120	Q8N960	986 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	GLIS3	Q8NEA6	775 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	ENGASE	Q8NFI3	743 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	GAD1	Q99259	594 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	HAPLN2	Q9GZV7	340 aa		13.08	□□□□□ -0.32
RFX2-215	ENST00000589742	CDT1	Q9H211	546 aa		13.08	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms