RNA–Protein interactions for RNA: ENST00000589706.1

SMAD4-208, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-208ENST00000589706 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 OTOP3Q7RTS5 596 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 PTRH1Q86Y79 214 aaKnown RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 SUGP1Q8IWZ8 645 aaKnown RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 SMC5Q8IY18 1101 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 KIAA1958Q8N8K9 716 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 MORC4Q8TE76 937 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 SNX21Q969T3 373 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 ELF4Q99607 663 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 PAIP2Q9BPZ3 127 aaKnown RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 CXorf56Q9H5V9 222 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 TNFRSF10DQ9UBN6 386 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 PNMA8BQ9ULN7 279 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 COA3Q9Y2R0 106 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 GIT1Q9Y2X7 761 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 NOC2LQ9Y3T9 749 aaKnown RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 X6R8D5 127 aa6.67□□□□□ -1.34
SMAD4-208ENST00000589706 COL11A2P13942 1736 aaPredicted RBP6.67□□□□□ -1.34
SMAD4-208ENST00000589706 C22orf46C9J442 243 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 KCNK3O14649 394 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 NKRFO15226 690 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 PF4V1P10720 104 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 HUNKP57058 714 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 SCAND1P57086 179 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 KRT85P78386 507 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 SMAD3P84022 425 aaKnown RBP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 BIRC2Q13490 618 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 LRRC32Q14392 662 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 NOLC1Q14978 699 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 SMAD2Q15796 467 aaKnown RBP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TMEM240Q5SV17 173 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 GPR158Q5T848 1215 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 ANGEL2Q5VTE6 544 aaKnown RBP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 LRCH2Q5VUJ6 765 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 PRR5LQ6MZQ0 368 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 NOSTRINQ8IVI9 506 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 HSCBQ8IWL3 235 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TPH2Q8IWU9 490 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 EXOC8Q8IYI6 725 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 ZNF610Q8N9Z0 462 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 SH3RF2Q8TEC5 729 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TBC1D22AQ8WUA7 517 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 ASB11Q8WXH4 323 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 MASTLQ96GX5 879 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 RPS6KC1Q96S38 1066 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 GLIS2Q9BZE0 524 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 PCIF1Q9H4Z3 704 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TOPORSQ9NS56 1045 aaPredicted RBP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TOMM22Q9NS69 142 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 MKS1Q9NXB0 559 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.66□□□□□ -1.34
SMAD4-208ENST00000589706 HDAC9Q9UKV0 1011 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 JRKLQ9Y4A0 524 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 PAXBP1Q9Y5B6 917 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 CUL9Q8IWT3 2517 aa6.66□□□□□ -1.34
SMAD4-208ENST00000589706 TJP1Q07157 1748 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 GOLGA8AA7E2F4 631 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 GOLGA8BA8MQT2 603 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 FADS2P1A8MWK0 482 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 MAN2B1O00754 1011 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 CTAGE5O15320 804 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 HIP1RO75146 1068 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 DGKIO75912 1065 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 FUCA1P04066 466 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 KIF11P52732 1056 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 HNRNPH2P55795 449 aaKnown RBP6.65□□□□□ -1.34
SMAD4-208ENST00000589706 TBC1D9BQ66K14 1250 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 FSTL4Q6MZW2 842 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 SLC4A10Q6U841 1118 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 OLFM4Q6UX06 510 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 EP400NLQ6ZTU2 488 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 DNAJC10Q8IXB1 793 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 CMIPQ8IY22 773 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 RTKN2Q8IZC4 609 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 PLEKHO2Q8TD55 490 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 MAP6Q96JE9 813 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 HRASLS5Q96KN8 279 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 JMJD8Q96S16 334 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 ZDHHC5Q9C0B5 715 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 PRDM16Q9HAZ2 1276 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
SMAD4-208ENST00000589706 SUFUQ9UMX1 484 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 MRFAP1Q9Y605 127 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 V9GYY5 206 aaPredicted RBP6.65□□□□□ -1.34
SMAD4-208ENST00000589706 AKAP11Q9UKA4 1901 aa6.65□□□□□ -1.34
SMAD4-208ENST00000589706 FLT4P35916 1363 aa6.65□□□□□ -1.35
SMAD4-208ENST00000589706 COL15A1P39059 1388 aa6.65□□□□□ -1.35
SMAD4-208ENST00000589706 NCAPD2Q15021 1401 aa6.65□□□□□ -1.35
SMAD4-208ENST00000589706 SCN11AQ9UI33 1791 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQ45 241 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-208ENST00000589706 A0A1W2PQY0 241 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 CCDC189A1A4V9 331 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 TRIM75PA6NK02 468 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 SCDO00767 359 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 FYB1O15117 783 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 CYP19A1P11511 503 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-208ENST00000589706 FSTP19883 344 aa6.64□□□□□ -1.35
SMAD4-208ENST00000589706 HDAC1Q13547 482 aaPredicted RBP6.64□□□□□ -1.35
SMAD4-208ENST00000589706 ODF1Q14990 250 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms