RNA–Protein interactions for RNA: ENST00000589428.5

R3HDM4-204, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 1,704 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-204ENST00000589428 TWF2Q6IBS0 349 aaKnown RBP23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 SLC24A5Q71RS6 500 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 RTN4RL1Q86UN2 441 aaPredicted RBP23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 ADSSL1Q8N142 457 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 SPIRE2Q8WWL2 714 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 PRIMPOLQ96LW4 560 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 NAT10Q9H0A0 1025 aaKnown RBP23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 CBX8Q9HC52 389 aa23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 RNF216Q9NWF9 866 aaPredicted RBP23.34■■□□□ 1.33
R3HDM4-204ENST00000589428 GRXCR1A8MXD5 290 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 TSPAN1O60635 241 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 UPP2O95045 317 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 COBLL1Q53SF7 1204 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 BPIFA3Q9BQP9 254 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 MRPL44Q9H9J2 332 aaKnown RBP23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 PTPRSQ13332 1948 aa23.33■■□□□ 1.33
R3HDM4-204ENST00000589428 FSD2A1L4K1 749 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 GJB5O95377 273 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 PRKCBP05771 671 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 AXLP30530 894 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 TMEM132AQ24JP5 1023 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 KLHL10Q6JEL2 608 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 FAM117BQ6P1L5 589 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 PPP4R3CPQ6ZMV5 832 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 TMCO2Q7Z6W1 182 aaPredicted RBP23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 TOP1MTQ969P6 601 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 ARHGAP28Q9P2N2 729 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 LRFN2Q9ULH4 789 aa23.33■■□□□ 1.32
R3HDM4-204ENST00000589428 H0YCG3 227 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 SLC16A4O15374 487 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 STAG3L1P0CL83 205 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 NMT1P30419 496 aaKnown RBP23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 RAB30Q15771 203 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 AMHR2Q16671 573 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 FAM187BQ17R55 369 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 NOTUMQ6P988 496 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 EPM2AIP1Q7L775 607 aaPredicted RBP23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 NPAS4Q8IUM7 802 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 FAM178BQ8IXR5 827 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 MED15Q96RN5 788 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 FZD8Q9H461 694 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 CTNND2Q9UQB3 1225 aa23.32■■□□□ 1.32
R3HDM4-204ENST00000589428 CNTNAP2Q9UHC6 1331 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 C9IYK1 514 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 K7ERI5 159 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 TLL1O43897 1013 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 MYBP10242 640 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 IQCB1Q15051 598 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 LUZP1Q86V48 1076 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 GUF1Q8N442 669 aaKnown RBP23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 SCFD1Q8WVM8 642 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 CCDC51Q96ER9 411 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 NTPCRQ9BSD7 190 aaKnown RBP23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 MSRAQ9UJ68 235 aa23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 LAMA2P24043 3122 aaKnown RBP23.31■■□□□ 1.32
R3HDM4-204ENST00000589428 K7ENM7 598 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 B4GALT5O43286 388 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 ERCC5P28715 1186 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 RAB27AP51159 221 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 RABGGTBP53611 331 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 PRPF4BQ13523 1007 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 STIM1Q13586 685 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 CT47A1Q5JQC4 288 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 AOPEPQ8N6M6 819 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 CPB2Q96IY4 423 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 PBX4Q9BYU1 374 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 TMEM134Q9H6X4 195 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 PCDHB7Q9Y5E2 793 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 PCDHA11Q9Y5I1 949 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 TTC3P53804 2025 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 ACKR2O00590 384 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 GCNT3O95395 438 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 ARF4P18085 180 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 SCP2P22307 547 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 HOXA11P31270 313 aaPredicted RBP23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 NCKAP1LP55160 1127 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 PAK1Q13153 545 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 ZNF720Q7Z2F6 126 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 SLC17A8Q8NDX2 589 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 TMEM161BQ8NDZ6 487 aa23.3■■□□□ 1.32
R3HDM4-204ENST00000589428 A0A0U1RQF3 1178 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 SOX1O00570 391 aaPredicted RBP23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 PSMA7O14818 248 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 MAPTP10636 758 aaKnown RBP23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 SKIP12755 728 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 PPP1R2P41236 205 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 STRN3Q13033 797 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 NELFBQ8WX92 580 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 YME1L1Q96TA2 773 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 RAD9AQ99638 391 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 TRAIPQ9BWF2 469 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 ELAC1Q9H777 363 aaKnown RBP23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 FAM105AQ9NUU6 356 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 TMEM161AQ9NX61 479 aa23.29■■□□□ 1.32
R3HDM4-204ENST00000589428 PPP1R37O75864 691 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 DNAJB2P25686 324 aa23.28■■□□□ 1.32
R3HDM4-204ENST00000589428 PBX2P40425 430 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms