RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 ZNF571Q7Z3V5 609 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 MAP4K3Q8IVH8 894 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 MMGT1Q8N4V1 131 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 XXYLT1Q8NBI6 393 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 NOA1Q8NC60 698 aaKnown RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 DNERQ8NFT8 737 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 SOCS4Q8WXH5 440 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 CAPZA3Q96KX2 299 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 OSBPL9Q96SU4 736 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 PNKPQ96T60 521 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 MMS19Q96T76 1030 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 RHOXF2Q9BQY4 288 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 EPC1Q9H2F5 836 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 ACBD3Q9H3P7 528 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 JPH1Q9HDC5 661 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 HMX1Q9NP08 348 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 CYP39A1Q9NYL5 469 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 FBXO40Q9UH90 709 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 KCNG1Q9UIX4 513 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 GJD2Q9UKL4 321 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 COLQQ9Y215 455 aaPredicted RBP10.81□□□□□ -0.68
VPS25-202ENST00000589219 RIPK3Q9Y572 518 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 NCANO14594 1321 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 IGSF9BQ9UPX0 1349 aa10.81□□□□□ -0.68
VPS25-202ENST00000589219 PLXNB2O15031 1838 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 COL11A1P12107 1806 aaPredicted RBP10.8□□□□□ -0.68
VPS25-202ENST00000589219 ATP9AO75110 1047 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 DGAT1O75907 488 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ICAM3P32942 547 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 VAMP7P51809 220 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 NAP1L1P55209 391 aaKnown RBP10.8□□□□□ -0.68
VPS25-202ENST00000589219 VSNL1P62760 191 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ERVK-9P63128 1117 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 APBA1Q02410 837 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ARID5AQ03989 594 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 KIAA0753Q2KHM9 967 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 FAM102BQ5T8I3 360 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 MIS18BP1Q6P0N0 1132 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 HDXQ7Z353 690 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 HAUS6Q7Z4H7 955 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 USP37Q86T82 979 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 CREG2Q8IUH2 290 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 KSR1Q8IVT5 923 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ANKLE1Q8NAG6 615 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 KCNN1Q92952 543 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 CALR3Q96L12 384 aaKnown RBP10.8□□□□□ -0.68
VPS25-202ENST00000589219 CRISPLD2Q9H0B8 497 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.8□□□□□ -0.68
VPS25-202ENST00000589219 POLD4Q9HCU8 107 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 A1CFQ9NQ94 594 aaKnown RBP10.8□□□□□ -0.68
VPS25-202ENST00000589219 HSPBP1Q9NZL4 362 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 SLC9A2Q9UBY0 812 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ADAMTS1Q9UHI8 967 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 NAGPAQ9UK23 515 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 USP20Q9Y2K6 914 aa10.8□□□□□ -0.68
VPS25-202ENST00000589219 ARID2Q68CP9 1835 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 MAP2K7O14733 419 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 EVI5O60447 810 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 SRGAP2O75044 1071 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 PALMO75781 387 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 H2AFZP0C0S5 128 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 SUPT20HL2P0C7V6 817 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 TRIM49P0CI25 452 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 TRIM49CP0CI26 452 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 KLRC1P26715 233 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 COPB2P35606 906 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 PLA2G4AP47712 749 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 MXI1P50539 228 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 NPEPPSP55786 919 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 PEX3P56589 373 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 CCNA1P78396 465 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 PRKCEQ02156 737 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 CFAP221Q4G0U5 840 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 CBWD6Q4V339 395 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 CBWD3Q5JTY5 395 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 CBWD5Q5RIA9 395 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 BEND6Q5SZJ8 279 aaPredicted RBP10.79□□□□□ -0.68
VPS25-202ENST00000589219 PLA2G4FQ68DD2 849 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
VPS25-202ENST00000589219 H2AFVQ71UI9 128 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 NECAB2Q7Z6G3 386 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 GPIHBP1Q8IV16 184 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 SYCE1Q8N0S2 351 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 TAF4BQ92750 862 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 PAGR1Q9BTK6 254 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 TLR10Q9BXR5 811 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 FUT8Q9BYC5 575 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 UBXN6Q9BZV1 441 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 ATP6V0A4Q9HBG4 840 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 GABBR1Q9UBS5 961 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 SALL4Q9UJQ4 1053 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 DNAJC12Q9UKB3 198 aa10.79□□□□□ -0.68
VPS25-202ENST00000589219 AJAP1Q9UKB5 411 aaPredicted RBP10.79□□□□□ -0.68
VPS25-202ENST00000589219 SPATA31C2B4DYI2 1134 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 KIAA0391O15091 583 aaKnown RBP10.78□□□□□ -0.68
VPS25-202ENST00000589219 SLC16A4O15374 487 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 BUB1O43683 1085 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 TMEM253P0C7T8 217 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 CYP2B6P20813 491 aa10.78□□□□□ -0.68
VPS25-202ENST00000589219 GTF2H1P32780 548 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms