RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 SUMF1Q8NBK3 374 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 PRPF31Q8WWY3 499 aaKnown RBP16.91■□□□□ 0.3
SF3A2-204ENST00000589118 CPB2Q96IY4 423 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 ZFP42Q96MM3 310 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 GAD1Q99259 594 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 APOL6Q9BWW8 343 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 SLC26A6Q9BXS9 759 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 NCOA5Q9HCD5 579 aaKnown RBP16.91■□□□□ 0.3
SF3A2-204ENST00000589118 ARHGEF3Q9NR81 526 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 COL4A3BPQ9Y5P4 624 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 NUMBLQ9Y6R0 609 aa16.91■□□□□ 0.3
SF3A2-204ENST00000589118 ZBTB39O15060 712 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 TGM5O43548 720 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 GAS2O43903 313 aaKnown RBP16.9■□□□□ 0.3
SF3A2-204ENST00000589118 EFEMP2O95967 443 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 ADH1AP07327 375 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 GLUD2P49448 558 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 SCNN1GP51170 649 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 USP11P51784 963 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 GPC5P78333 572 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 CDC42EP1Q00587 391 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 SNW1Q13573 536 aaKnown RBP16.9■□□□□ 0.3
SF3A2-204ENST00000589118 HTR4Q13639 388 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 CCDC12Q8WUD4 166 aaPredicted RBP16.9■□□□□ 0.3
SF3A2-204ENST00000589118 GPR62Q9BZJ7 368 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 RXFP1Q9HBX9 757 aa16.9■□□□□ 0.3
SF3A2-204ENST00000589118 DTNBO60941 627 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 ITGA4P13612 1032 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 CD72P21854 359 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 MLH1P40692 756 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 PUM1Q14671 1186 aaKnown RBP eCLIP16.89■□□□□ 0.295e-7■□□□□ 8.4
SF3A2-204ENST00000589118 PARM1Q6UWI2 310 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 CDR2LQ86X02 465 aaPredicted RBP16.89■□□□□ 0.29
SF3A2-204ENST00000589118 RNF168Q8IYW5 571 aaPredicted RBP16.89■□□□□ 0.29
SF3A2-204ENST00000589118 RUBCNQ92622 972 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 STAMQ92783 540 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 FGF14Q92915 247 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 SEMA4AQ9H3S1 761 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 IPPQ9Y573 584 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 PATJQ8NI35 1801 aa16.89■□□□□ 0.29
SF3A2-204ENST00000589118 ARL5CA6NH57 179 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 ANHXE9PGG2 379 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 NCLP19338 710 aaKnown RBP16.88■□□□□ 0.29
SF3A2-204ENST00000589118 NLRP5P59047 1200 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 LAMTOR4Q0VGL1 99 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 NONOQ15233 471 aaKnown RBP eCLIP16.88■□□□□ 0.293e-6■■■□□ 18.1
SF3A2-204ENST00000589118 TSGA10IPQ3SY00 556 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 Q4G0T1 1027 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 PHLDB3Q6NSJ2 640 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 PRSS55Q6UWB4 352 aaPredicted RBP16.88■□□□□ 0.29
SF3A2-204ENST00000589118 PJA1Q8NG27 643 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 ETNPPLQ8TBG4 499 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 BICD2Q8TD16 824 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 DLL3Q9NYJ7 618 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 KANSL3Q9P2N6 904 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 ARID2Q68CP9 1835 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 GPR179Q6PRD1 2367 aa16.88■□□□□ 0.29
SF3A2-204ENST00000589118 SLC37A4O43826 429 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 PSMC5P62195 406 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 AKAP17AQ02040 695 aaKnown RBP16.87■□□□□ 0.29
SF3A2-204ENST00000589118 DSG1Q02413 1049 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 DSC1Q08554 894 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 LILRA6Q6PI73 481 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 GRASPQ7Z6J2 395 aaPredicted RBP16.87■□□□□ 0.29
SF3A2-204ENST00000589118 RNF149Q8NC42 400 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 CEP170P1Q96L14 293 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 AIFM3Q96NN9 605 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 PAAF1Q9BRP4 392 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 PRKD2Q9BZL6 878 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 CHST7Q9NS84 486 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 KLK14Q9P0G3 267 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 CNTNAP2Q9UHC6 1331 aa16.87■□□□□ 0.29
SF3A2-204ENST00000589118 CCDC196A0A1B0GTZ2 297 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 CARNS1A5YM72 827 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 AKAP5P24588 427 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 TSSK4Q6SA08 328 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 SRGAP1Q7Z6B7 1085 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 RDM1Q8NG50 284 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 RSPH1Q8WYR4 309 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 JAKMIP1Q96N16 626 aaKnown RBP16.86■□□□□ 0.29
SF3A2-204ENST00000589118 LARP6Q9BRS8 491 aaKnown RBP16.86■□□□□ 0.29
SF3A2-204ENST00000589118 SLKQ9H2G2 1235 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-204ENST00000589118 SPATA6Q9NWH7 488 aaPredicted RBP16.86■□□□□ 0.29
SF3A2-204ENST00000589118 CACNA1BQ00975 2339 aa16.86■□□□□ 0.29
SF3A2-204ENST00000589118 SPTBN2O15020 2390 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 CYP3A7-CYP3A51PA0A087WV96 503 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 TSPAN1O60635 241 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 FSHRP23945 695 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 CYP3A7P24462 503 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 RCAN1P53805 252 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 STARD6P59095 220 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 CSTF1Q05048 431 aaKnown RBP16.85■□□□□ 0.29
SF3A2-204ENST00000589118 FUT10Q6P4F1 479 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 GSTCDQ8NEC7 633 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 CCDC148Q8NFR7 591 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 HASPINQ8TF76 798 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 RNF26Q9BY78 433 aaPredicted RBP16.85■□□□□ 0.29
SF3A2-204ENST00000589118 CXCL16Q9H2A7 254 aa16.85■□□□□ 0.29
SF3A2-204ENST00000589118 NXF3Q9H4D5 531 aaKnown RBP16.85■□□□□ 0.29
SF3A2-204ENST00000589118 DHX33Q9H6R0 707 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms