RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 IFIT5Q13325 482 aaKnown RBP9.23□□□□□ -0.93
ATG4D-210ENST00000588972 LSAMPQ13449 338 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 LAPTM5Q13571 262 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 NKPD1Q17RQ9 610 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 GAB4Q2WGN9 574 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 RABL6Q3YEC7 729 aaPredicted RBP9.23□□□□□ -0.93
ATG4D-210ENST00000588972 TREML4Q6UXN2 200 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 RNF111Q6ZNA4 994 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 ITPRIPQ8IWB1 547 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 EFHBQ8N7U6 833 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 CD99L2Q8TCZ2 262 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 ZBED3Q96IU2 234 aaPredicted RBP9.23□□□□□ -0.93
ATG4D-210ENST00000588972 DEFB129Q9H1M3 183 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 C7orf69Q9H7B7 122 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 TCF7L1Q9HCS4 588 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 GOLGA6AQ9NYA3 693 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 PTPN22Q9Y2R2 807 aa9.23□□□□□ -0.93
ATG4D-210ENST00000588972 TIMM13Q9Y5L4 95 aaPredicted RBP9.23□□□□□ -0.93
ATG4D-210ENST00000588972 LRRFIP2Q9Y608 721 aaKnown RBP9.23□□□□□ -0.93
ATG4D-210ENST00000588972 IGHMBP2P38935 993 aaKnown RBP9.22□□□□□ -0.93
ATG4D-210ENST00000588972 BCL6P41182 706 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 OXCT1P55809 520 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CRHR2Q13324 411 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 PCBP2Q15366 365 aaKnown RBP eCLIP9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CRY1Q16526 586 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CCDC57Q2TAC2 916 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 GFOD2Q3B7J2 385 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 TTLL5Q6EMB2 1281 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 OTUD7BQ6GQQ9 843 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CXorf57Q6NSI4 855 aaKnown RBP9.22□□□□□ -0.93
ATG4D-210ENST00000588972 KLHDC4Q8TBB5 520 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CHAMP1Q96JM3 812 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CLMNQ96JQ2 1002 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 MPHOSPH8Q99549 860 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 C14orf119Q9NWQ9 140 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 FZD1Q9UP38 647 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 CUL9Q8IWT3 2517 aa9.22□□□□□ -0.93
ATG4D-210ENST00000588972 C7orf72A4D263 438 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 SNUPNO95149 360 aaKnown RBP9.21□□□□□ -0.94
ATG4D-210ENST00000588972 EN2P19622 333 aaPredicted RBP9.21□□□□□ -0.94
ATG4D-210ENST00000588972 CCND1P24385 295 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 RPL11P62913 178 aaKnown RBP9.21□□□□□ -0.94
ATG4D-210ENST00000588972 CYP27A1Q02318 531 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 DLGAP5Q15398 846 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 SUPT20HL1Q3ZLR7 823 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 C20orf194Q5TEA3 1177 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 BROXQ5VW32 411 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 TPH2Q8IWU9 490 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 SPACA3Q8IXA5 215 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 SMC5Q8IY18 1101 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 C1orf162Q8NEQ5 155 aaPredicted RBP9.21□□□□□ -0.94
ATG4D-210ENST00000588972 SLC39A13Q96H72 371 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 ZNF333Q96JL9 665 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 HSPA12BQ96MM6 686 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 KCNJ15Q99712 375 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 PUS3Q9BZE2 481 aaKnown RBP9.21□□□□□ -0.94
ATG4D-210ENST00000588972 ANKRD2Q9GZV1 360 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 ZSWIM5Q9P217 1185 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 ZNF804BA4D1E1 1349 aa9.21□□□□□ -0.94
ATG4D-210ENST00000588972 A0A0C4DFX4 3053 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 TMEM82A0PJX8 343 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 H3BS24 57 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 ZNF561-AS1K7EIQ3 104 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 SNAP23O00161 211 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 TAF5LO75529 589 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 GNAI3P08754 354 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 PDE6AP16499 860 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 ENDOUP21128 410 aaKnown RBP9.2□□□□□ -0.94
ATG4D-210ENST00000588972 LORP23490 312 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-210ENST00000588972 KLRK1P26718 216 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 KCNJ4P48050 445 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 SP3Q02447 781 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 CHRNDQ07001 517 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 SLC9C1Q4G0N8 1177 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 ZPBP2Q6X784 338 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 THAP5Q7Z6K1 395 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 FBXL6Q8N531 539 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 NAT16Q8N8M0 369 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 FAM181AQ8N9Y4 354 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 UBE2FQ969M7 185 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 ZNF775Q96BV0 537 aaPredicted RBP9.2□□□□□ -0.94
ATG4D-210ENST00000588972 FAXDC2Q96IV6 333 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 SCYL1Q96KG9 808 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 SMURF1Q9HCE7 757 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 CLDND1Q9NY35 253 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 DUSP13Q9UII6 198 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 RAXQ9Y2V3 346 aa9.2□□□□□ -0.94
ATG4D-210ENST00000588972 COL6A3P12111 3177 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 EIF3JO75822 258 aaKnown RBP9.19□□□□□ -0.94
ATG4D-210ENST00000588972 RFX5P48382 616 aaPredicted RBP9.19□□□□□ -0.94
ATG4D-210ENST00000588972 GTF2A2P52657 109 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 ARHGEF6Q15052 776 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 LRRC24Q50LG9 513 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 TMEM240Q5SV17 173 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 CYP2R1Q6VVX0 501 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 LDHAL6AQ6ZMR3 332 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 NBPF11Q86T75 865 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 DGKHQ86XP1 1220 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 CPA6Q8N4T0 437 aa9.19□□□□□ -0.94
ATG4D-210ENST00000588972 DPF3Q92784 378 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms