RNA–Protein interactions for RNA: ENST00000588905.5

GCDH-208, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 5

Gene GCDH, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-208ENST00000588905 A0A1B0GUA9 196 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 CARNS1A5YM72 827 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 B4GALT5O43286 388 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 HIP1RO75146 1068 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 SSBP05455 408 aaKnown RBP eCLIP17.08■□□□□ 0.32
GCDH-208ENST00000588905 ITGA4P13612 1032 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 KCNA5P22460 613 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 IRS1P35568 1242 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 ALDH7A1P49419 539 aaKnown RBP17.08■□□□□ 0.32
GCDH-208ENST00000588905 KRT17Q04695 432 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 HYAL1Q12794 435 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 MAPK7Q13164 816 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 LEXMQ3ZCV2 418 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 ARSHQ5FYA8 562 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 KRI1Q8N9T8 703 aaKnown RBP17.08■□□□□ 0.32
GCDH-208ENST00000588905 SMG8Q8ND04 991 aaKnown RBP17.08■□□□□ 0.32
GCDH-208ENST00000588905 URGCPQ8TCY9 931 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 MICAL1Q8TDZ2 1067 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 MRPS27Q92552 414 aaKnown RBP17.08■□□□□ 0.32
GCDH-208ENST00000588905 TLR9Q9NR96 1032 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 BLOC1S4Q9NUP1 217 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 IPPQ9Y573 584 aa17.08■□□□□ 0.32
GCDH-208ENST00000588905 IL9P15248 144 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 PLCG1P19174 1290 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 GUCY2CP25092 1073 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 PBX3P40426 434 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 BCAR1P56945 870 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 RNASELQ05823 741 aaKnown RBP17.07■□□□□ 0.32
GCDH-208ENST00000588905 STK38Q15208 465 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 MAPK6Q16659 721 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 PDE12Q6L8Q7 609 aaKnown RBP17.07■□□□□ 0.32
GCDH-208ENST00000588905 SLC39A11Q8N1S5 342 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 TRIM6Q9C030 488 aaPredicted RBP17.07■□□□□ 0.32
GCDH-208ENST00000588905 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
GCDH-208ENST00000588905 DAXXQ9UER7 740 aaPredicted RBP17.07■□□□□ 0.32
GCDH-208ENST00000588905 NPHP3-ACAD11A0A0J9YXS1 232 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 SFI1A8K8P3 1242 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 ACKR2O00590 384 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 SPTLC2O15270 562 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 ZC3H11AO75152 810 aaKnown RBP eCLIP17.06■□□□□ 0.32
GCDH-208ENST00000588905 YEATS4O95619 227 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 BRD1O95696 1058 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 PRKCBP05771 671 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 EFNA5P52803 228 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 ERVFC1P60507 584 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 RAD51AP2Q09MP3 1159 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 BECN1Q14457 450 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 CTC1Q2NKJ3 1217 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 EP400NLQ6ZTU2 488 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 HACE1Q8IYU2 909 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 RAD54LQ92698 747 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 KIFC3Q9BVG8 833 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 TIPINQ9BVW5 301 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 CCDC113Q9H0I3 377 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 RNF39Q9H2S5 420 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 IGFLR1Q9H665 355 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 NRDE2Q9H7Z3 1164 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 CLDND1Q9NY35 253 aa17.06■□□□□ 0.32
GCDH-208ENST00000588905 TTLL13PA6NNM8 815 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 NT5C1B-RDH14C9J2C7 533 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 FSCN2O14926 492 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 PPP6R2O75170 966 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 NPTXRO95502 500 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 GALTP07902 379 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 DDIT3P35638 169 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 NPTX2P47972 431 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 PEX3P56589 373 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 PRPF4BQ13523 1007 aaKnown RBP17.05■□□□□ 0.32
GCDH-208ENST00000588905 DHX8Q14562 1220 aaKnown RBP17.05■□□□□ 0.32
GCDH-208ENST00000588905 MCM6Q14566 821 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 TMEM132AQ24JP5 1023 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 ATL3Q6DD88 541 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 ADGRD2Q7Z7M1 963 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 CDR2LQ86X02 465 aaPredicted RBP17.05■□□□□ 0.32
GCDH-208ENST00000588905 FAM178BQ8IXR5 827 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 TMEM169Q96HH4 297 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 NTPCRQ9BSD7 190 aaKnown RBP17.05■□□□□ 0.32
GCDH-208ENST00000588905 LRFN3Q9BTN0 628 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 GBP3Q9H0R5 595 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 TLE6Q9H808 572 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 NGRNQ9NPE2 291 aaKnown RBP17.05■□□□□ 0.32
GCDH-208ENST00000588905 KCND2Q9NZV8 630 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 USP20Q9Y2K6 914 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 GIT1Q9Y2X7 761 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 HES2Q9Y543 173 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 PCDHGC5Q9Y5F6 944 aa17.05■□□□□ 0.32
GCDH-208ENST00000588905 CCDC169A6NNP5 214 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 H3BQ06 376 aaPredicted RBP17.04■□□□□ 0.32
GCDH-208ENST00000588905 N4BP3O15049 544 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 INPPL1O15357 1258 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 LIG1P18858 919 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 GTF2F1P35269 517 aaKnown RBP eCLIP17.04■□□□□ 0.32
GCDH-208ENST00000588905 LTBRP36941 435 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 NRIP1P48552 1158 aa17.04■□□□□ 0.32
GCDH-208ENST00000588905 AFF1P51825 1210 aaKnown RBP17.04■□□□□ 0.32
GCDH-208ENST00000588905 DNM1Q05193 864 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms