RNA–Protein interactions for RNA: ENST00000588687.5

CCDC43-204, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-204ENST00000588687 TAS1R1Q7RTX1 841 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 TMEM87AQ8NBN3 555 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 RNF149Q8NC42 400 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 CMASQ8NFW8 434 aaPredicted RBP20.57■□□□□ 0.88
CCDC43-204ENST00000588687 RPS6KC1Q96S38 1066 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 EIF2AQ9BY44 585 aaKnown RBP20.57■□□□□ 0.88
CCDC43-204ENST00000588687 RNF39Q9H2S5 420 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 KANSL3Q9P2N6 904 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 DUSP12Q9UNI6 340 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 IPPQ9Y573 584 aa20.57■□□□□ 0.88
CCDC43-204ENST00000588687 CCDC194A0A1B0GVG4 234 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 FAM205CA6NFA0 338 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 DTNBO60941 627 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 KLRC2P26717 231 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 OTOP3Q7RTS5 596 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 IFNLR1Q8IU57 520 aaPredicted RBP20.56■□□□□ 0.88
CCDC43-204ENST00000588687 EXOC8Q8IYI6 725 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 DYDC2Q96IM9 177 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 RHOBTB2Q9BYZ6 727 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 KCNK12Q9HB15 430 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 MAN1C1Q9NR34 630 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 MRPL17Q9NRX2 175 aaKnown RBP20.56■□□□□ 0.88
CCDC43-204ENST00000588687 FAN1Q9Y2M0 1017 aa20.56■□□□□ 0.88
CCDC43-204ENST00000588687 MTCL1Q9Y4B5 1905 aaKnown RBP20.55■□□□□ 0.88
CCDC43-204ENST00000588687 ARL5CA6NH57 179 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 TEX28O15482 410 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 CCNT1O60563 726 aaKnown RBP20.55■□□□□ 0.88
CCDC43-204ENST00000588687 CTDNEP1O95476 244 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 ALDH2P05091 517 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 MLH1P40692 756 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 PTENP60484 403 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 TDGQ13569 410 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 KIAA0319Q5VV43 1072 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 CPLX2Q6PUV4 134 aaKnown RBP20.55■□□□□ 0.88
CCDC43-204ENST00000588687 PIK3AP1Q6ZUJ8 805 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 TNFRSF25Q93038 417 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 ACSF2Q96CM8 615 aaPredicted RBP20.55■□□□□ 0.88
CCDC43-204ENST00000588687 RXFP1Q9HBX9 757 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 PRG3Q9Y2Y8 225 aaPredicted RBP20.55■□□□□ 0.88
CCDC43-204ENST00000588687 HES2Q9Y543 173 aa20.55■□□□□ 0.88
CCDC43-204ENST00000588687 CACNA1AO00555 2505 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 PI15O43692 258 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 URODP06132 367 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 AOC1P19801 751 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 CYP4A11Q02928 519 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 MBTD1Q05BQ5 628 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 CTTNQ14247 550 aaKnown RBP20.54■□□□□ 0.88
CCDC43-204ENST00000588687 PCBP1Q15365 356 aaKnown RBP eCLIP20.54■□□□□ 0.88
CCDC43-204ENST00000588687 NCAPH2Q6IBW4 605 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 CNNM3Q8NE01 707 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 GSTCDQ8NEC7 633 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 TCP11Q8WWU5 503 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 ZNF707Q96C28 371 aaPredicted RBP20.54■□□□□ 0.88
CCDC43-204ENST00000588687 CCDC51Q96ER9 411 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 ZFP42Q96MM3 310 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 GAD1Q99259 594 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 MTRQ99707 1265 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 ZSWIM4Q9H7M6 989 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 MIOSQ9NXC5 875 aa20.54■□□□□ 0.88
CCDC43-204ENST00000588687 C2CD2LO14523 706 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 ASAP2O43150 1006 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 ITGA4P13612 1032 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 AXLP30530 894 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 SCNN1GP51170 649 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 DSG1Q02413 1049 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 CAPSQ13938 189 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 XKR9Q5GH70 373 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 ASAP3Q8TDY4 903 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 CPB2Q96IY4 423 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 FAM193BQ96PV7 902 aaPredicted RBP20.53■□□□□ 0.88
CCDC43-204ENST00000588687 SLKQ9H2G2 1235 aaPredicted RBP20.53■□□□□ 0.88
CCDC43-204ENST00000588687 NXF3Q9H4D5 531 aaKnown RBP20.53■□□□□ 0.88
CCDC43-204ENST00000588687 WDR6Q9NNW5 1121 aaKnown RBP20.53■□□□□ 0.88
CCDC43-204ENST00000588687 UBN1Q9NPG3 1134 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 CHST7Q9NS84 486 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 PDRG1Q9NUG6 133 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 TPCN1Q9ULQ1 816 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 CLUHO75153 1309 aa20.53■□□□□ 0.88
CCDC43-204ENST00000588687 NARSO43776 548 aaKnown RBP20.52■□□□□ 0.88
CCDC43-204ENST00000588687 RFPL2O75678 378 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 CDKL5O76039 1030 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 ERLIN2O94905 339 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 SLITRK3O94933 977 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 LYPLA2O95372 231 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 ADH1AP07327 375 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 OR1G1P47890 313 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 GLUD2P49448 558 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 AK2P54819 239 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 POU5F1BQ06416 359 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 NR5A1Q13285 461 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 NOTUMQ6P988 496 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 CCDC105Q8IYK2 499 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 HSD17B14Q9BPX1 270 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 CSRNP2Q9H175 543 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 MFSD1Q9H3U5 465 aa20.52■□□□□ 0.88
CCDC43-204ENST00000588687 ZMYM2Q9UBW7 1377 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 WNT7AO00755 349 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 PFKFB2O60825 505 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 GLUD1P00367 558 aa20.51■□□□□ 0.87
CCDC43-204ENST00000588687 ARF4P18085 180 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms