RNA–Protein interactions for RNA: ENST00000588131.1

VMP1-207, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-207ENST00000588131 GNA14O95837 355 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 GARTP22102 1010 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 DEKP35659 375 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 MTIF2P46199 727 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 MNX1P50219 401 aaPredicted RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 MARSP56192 900 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 MRPS6P82932 125 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 PRPF4BQ13523 1007 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 MIIPQ5JXC2 388 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 ZPBP2Q6X784 338 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 SRGAP1Q7Z6B7 1085 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 TRIM59Q8IWR1 403 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 NME8Q8N427 588 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 TMEM40Q8WWA1 233 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 POMGNT1Q8WZA1 660 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 DHX38Q92620 1227 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 MRFAP1L1Q96HT8 127 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 ACO2Q99798 780 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 TUBGCP2Q9BSJ2 902 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
VMP1-207ENST00000588131 ANKFY1Q9P2R3 1169 aa12.36□□□□□ -0.43
VMP1-207ENST00000588131 ARVCFO00192 962 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 B4GALT4O60513 344 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 TSPAN1O60635 241 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 ADRB2P07550 413 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 CTSHP09668 335 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 EPB41P11171 864 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 PRKCSHP14314 528 aaPredicted RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 DARSP14868 501 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 PSMC2P35998 433 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 CDC42EP1Q00587 391 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 MGAT3Q09327 533 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 PTK7Q13308 1070 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 NR1I3Q14994 352 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 MAN2A1Q16706 1144 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 TRIM71Q2Q1W2 868 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 ATF7IP2Q5U623 682 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 EEF1DP3Q658K8 133 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 TSHZ1Q6ZSZ6 1077 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 FRMD5Q7Z6J6 570 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 CDR2LQ86X02 465 aaPredicted RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 CBWD2Q8IUF1 395 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 FAM186BQ8IYM0 893 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 XXYLT1Q8NBI6 393 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 RDH13Q8NBN7 331 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 ANKRD20A12PQ8NF67 263 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 ANP32BQ92688 251 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 PDLIM2Q96JY6 352 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 MKNK1Q9BUB5 465 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 CELF4Q9BZC1 486 aaKnown RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 GCOM2Q9BZD3 368 aaPredicted RBP12.35□□□□□ -0.43
VMP1-207ENST00000588131 TRPV6Q9H1D0 765 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 TRPV2Q9Y5S1 764 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 CDY2AQ9Y6F7 541 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 CNTNAP2Q9UHC6 1331 aa12.35□□□□□ -0.43
VMP1-207ENST00000588131 A0A0B4J269 797 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 LGALS16A8MUM7 142 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 N4BP3O15049 544 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 TOM1L1O75674 476 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 TFRCP02786 760 aaKnown RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 HARSP12081 509 aaKnown RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 ARF4P18085 180 aaPredicted RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 PROZP22891 400 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 CDC25BP30305 580 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 MATR3P43243 847 aaKnown RBP eCLIP12.34□□□□□ -0.43
VMP1-207ENST00000588131 CDK7P50613 346 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 CRYBB1P53674 252 aaPredicted RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 CCDC173Q0VFZ6 552 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 SNX17Q15036 470 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 FILIP1LQ4L180 1135 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 VWA3BQ502W6 1294 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 ZBTB41Q5SVQ8 909 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 SLFN12LQ6IEE8 588 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 ZBTB33Q86T24 672 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 GPD1LQ8N335 351 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 FBXL18Q96ME1 805 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 PPP1R9BQ96SB3 815 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 PTPRHQ9HD43 1115 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 ARMCX3Q9UH62 379 aaPredicted RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 AGO2Q9UKV8 859 aaKnown RBP12.34□□□□□ -0.43
VMP1-207ENST00000588131 NOD1Q9Y239 953 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 TNFSF13BQ9Y275 285 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 FRMD4BQ9Y2L6 1034 aa12.34□□□□□ -0.43
VMP1-207ENST00000588131 FAM189A1O60320 539 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 ERLIN2O94905 339 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 CHRNA1P02708 482 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 EIF4BP23588 611 aaKnown RBP12.33□□□□□ -0.44
VMP1-207ENST00000588131 THPOP40225 353 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 PBX1P40424 430 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 GJA8P48165 433 aa12.33□□□□□ -0.44
VMP1-207ENST00000588131 MCL1Q07820 350 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms