RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 HOXA11P31270 313 aaPredicted RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 LIG4P49917 911 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 COASYQ13057 564 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 PAN2Q504Q3 1202 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 SPOUT1Q5T280 376 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 CMTR2Q8IYT2 770 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 LRRC43Q8N309 656 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 FIBCD1Q8N539 461 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM87AQ8NBN3 555 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 URGCPQ8TCY9 931 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 DNAJC19Q96DA6 116 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 C7orf25Q9BPX7 421 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 TCHPQ9BT92 498 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 GOLPH3LQ9H4A5 285 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 PDZD7Q9H5P4 517 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 UBN1Q9NPG3 1134 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 EXOC1Q9NV70 894 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 ANKFY1Q9P2R3 1169 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 EXOC7Q9UPT5 735 aa13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 YBX2Q9Y2T7 364 aaKnown RBP13.04□□□□□ -0.32
SDHDP1-201ENST00000588055 FRMD3A2A2Y4 597 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF623O75123 536 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF202O95125 648 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 FGFR1P11362 822 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ITGA4P13612 1032 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 MYOGP15173 224 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 UBE2HP62256 183 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 FAM189BP81408 668 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 CNNM4Q6P4Q7 775 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ZPBP2Q6X784 338 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 UNC13DQ70J99 1090 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 PAGE5Q96GU1 130 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 SAMD11Q96NU1 681 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 TGS1Q96RS0 853 aaKnown RBP13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 RPS6KC1Q96S38 1066 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 EIF2AQ9BY44 585 aaKnown RBP13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 BLZF1Q9H2G9 400 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ST6GALNAC4Q9H4F1 302 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 ZNF576Q9H609 170 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 RSAD1Q9HA92 442 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 AAASQ9NRG9 546 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 TBC1D7Q9P0N9 293 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 IPPQ9Y573 584 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 PCDHB13Q9Y5F0 798 aa13.03□□□□□ -0.32
SDHDP1-201ENST00000588055 RALGAPA2Q2PPJ7 1873 aa13.02□□□□□ -0.32
SDHDP1-201ENST00000588055 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 LCHNA4D1U4 455 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 CARNS1A5YM72 827 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 GTPBP6O43824 516 aaPredicted RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 TOM1L1O75674 476 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 NMT1P30419 496 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 YARSP54577 528 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 FAM26FQ5R3K3 315 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 MPZL3Q6UWV2 235 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 ZNF598Q86UK7 904 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 CDR2LQ86X02 465 aaPredicted RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 MAP4K3Q8IVH8 894 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 GRAMD1CQ8IYS0 662 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 SYCP3Q8IZU3 236 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 SP7Q8TDD2 431 aaPredicted RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 HELQQ8TDG4 1101 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 KCNN1Q92952 543 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 ACO2Q99798 780 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 TARS2Q9BW92 718 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 NXF3Q9H4D5 531 aaKnown RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 TOPORSQ9NS56 1045 aaPredicted RBP13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 TBX20Q9UMR3 447 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 INPP5FQ9Y2H2 1132 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 ZMYM2Q9UBW7 1377 aa13.02□□□□□ -0.33
SDHDP1-201ENST00000588055 LINC01553A4QN01 128 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 RBAK-RBAKDNI3L0D1 243 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 CLDN3O15551 220 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 MCF2P10911 925 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 ATF7P17544 494 aaPredicted RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 CTNNB1P35222 781 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 GTF2BQ00403 316 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 TAP1Q03518 808 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 CUL4BQ13620 913 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 POSTNQ15063 836 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 UBXN11Q5T124 520 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 L1TD1Q5T7N2 865 aaKnown RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 NT5DC1Q5TFE4 455 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 TAS1R3Q7RTX0 852 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 ZNF720Q7Z2F6 126 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 FMR1NBQ8N0W7 255 aaPredicted RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 DEFB123Q8N688 67 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 LPPQ93052 612 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 ZNF689Q96CS4 500 aaPredicted RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 FAM193BQ96PV7 902 aaPredicted RBP13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 ACCSQ96QU6 501 aa13.01□□□□□ -0.33
SDHDP1-201ENST00000588055 CCDC94Q9BW85 323 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms