RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	HYOU1	Q9Y4L1	999 aa		11.77	□□□□□ -0.53
ILF3-208	ENST00000587928	STYXL1	Q9Y6J8	313 aa		11.77	□□□□□ -0.53
ILF3-208	ENST00000587928	HSF2BP	O75031	334 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	PAEP	P09466	180 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	DDX27	Q96GQ7	796 aa	Known RBP	11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	RIT2	Q99578	217 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	VCPKMT	Q9H867	229 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	BAIAP2L1	Q9UHR4	511 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	PPP1R12B	O60237	982 aa	Predicted RBP	11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	NR3C1	P04150	777 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	AR	P10275	920 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	BYSL	Q13895	437 aa	Known RBP	11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	FBXO11	Q86XK2	927 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	CASKIN2	Q8WXE0	1202 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	P3H4	Q92791	437 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	ZSWIM4	Q9H7M6	989 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	3e-6	■■■■■ 29.3
ILF3-208	ENST00000587928	AGPAT3	Q9NRZ7	376 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	SLC12A6	Q9UHW9	1150 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	GH2	P01242	217 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	RRAGA	Q7L523	313 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	ZSWIM2	Q8NEG5	633 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	MS4A14	Q96JA4	679 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	11.76	□□□□□ -0.53	7e-6	■■□□□ 11.9
ILF3-208	ENST00000587928	CNTN6	Q9UQ52	1028 aa		11.76	□□□□□ -0.53
ILF3-208	ENST00000587928	LTBP3	Q9NS15	1303 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	HMGB1P1	B2RPK0	211 aa	Predicted RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	TBCA	O75347	108 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	ICAM1	P05362	532 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	PTGIR	P43119	386 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	ERVK-9	P63128	1117 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	PCNX4	Q63HM2	1172 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	PDGFD	Q9GZP0	370 aa	Predicted RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	SLC38A10	Q9HBR0	1119 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	STIM2	Q9P246	746 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	ATP2A1	O14983	1001 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	PALM	O75781	387 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	DNAJC8	O75937	253 aa	Predicted RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	GAP43	P17677	238 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	PAX3	P23760	479 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	CKAP4	Q07065	602 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	CTTN	Q14247	550 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	JDP2	Q8WYK2	163 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	SLCO2A1	Q92959	643 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	TDRD3	Q9H7E2	651 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	MMRN2	Q9H8L6	949 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	AGO4	Q9HCK5	861 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	TSKS	Q9UJT2	592 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	LRRN2	O75325	713 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	ECEL1	O95672	775 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	OAT	P04181	439 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	GGCX	P38435	758 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	RAB27A	P51159	221 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	SNAP25	P60880	206 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	WLS	Q5T9L3	541 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	EMB	Q6PCB8	327 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	GSPT2	Q8IYD1	628 aa	Known RBP	11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	TEX9	Q8N6V9	391 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	C12orf42	Q96LP6	360 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	IGKV6D-21	A0A0A0MT36	114 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	TCRBV5S1A1T	A0A578	114 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	USH1G	Q495M9	461 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	WDR78	Q5VTH9	848 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	SLC30A10	Q6XR72	485 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	NCAPG2	Q86XI2	1143 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	CSRNP1	Q96S65	589 aa		11.75	□□□□□ -0.53
ILF3-208	ENST00000587928	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	AFP	P02771	609 aa	Known RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	CTNNA2	P26232	953 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	CHRNA5	P30532	468 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	PLS1	Q14651	629 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	CHURC1	Q8WUH1	139 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	MXRA8	Q9BRK3	442 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	LSM14B	Q9BX40	385 aa	Known RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	ADAM7	Q9H2U9	754 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	MMADHC	Q9H3L0	296 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	TRAF5	O00463	557 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	GDF11	O95390	407 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	GCLC	P48506	637 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	UGCG	Q16739	394 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	GNPTAB	Q3T906	1256 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	ZDHHC24	Q6UX98	284 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	STXBP4	Q6ZWJ1	553 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	C12orf50	Q8NA57	414 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	NR2E1	Q9Y466	385 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	FES	P07332	822 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	CACNB1	Q02641	598 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	EN1	Q05925	392 aa	Predicted RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	C6orf89	Q6UWU4	347 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	CCDC42	Q96M95	316 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	EURL	Q9NYK6	297 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	DNM3	Q9UQ16	869 aa		11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	BZW2	Q9Y6E2	419 aa	Known RBP	11.74	□□□□□ -0.53
ILF3-208	ENST00000587928	ADGRA2	Q96PE1	1338 aa		11.73	□□□□□ -0.53
ILF3-208	ENST00000587928	LIN7A	O14910	233 aa	Predicted RBP	11.73	□□□□□ -0.53
ILF3-208	ENST00000587928	AKR1B10	O60218	316 aa		11.73	□□□□□ -0.53
ILF3-208	ENST00000587928	ATG7	O95352	703 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms